Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq295 152 6e-32 seq426 89.7 6e-13 >seq295 Length=8791 Score = 152 bits (168), Expect = 6e-32 Identities = 449/692 (65%), Gaps = 9/692 (1%) Strand=Plus/Minus Query 106691 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 106750 |||||| ||| || || |||||||| || || | || | | ||||| || | Sbjct 1933 TACTTTTCGTAAAGCGCATCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCA 1874 Query 106751 TCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGA 106810 | || || || |||| ||| | ||| || |||||| ||||||||||| || || || Sbjct 1873 TTGGGGCAAAAGAGAGTCCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGC 1814 Query 106811 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870 |||| || | ||||||||||| ||| | ||||| | ||| ||||| || Sbjct 1813 GTCCAGAGAGCAAGAAAGAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGG 1754 Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 106930 | || | ||||| | |||||| | |||||| ||||| ||||| | |||| || ||| Sbjct 1753 AGGTCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCC- 1695 Query 106931 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984 | | ||| || | |||| ||||| | || || ||| || ||||| ||| Sbjct 1694 --TGGCCGCTTGTTACCTCCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGC 1637 Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044 || |||| ||| |||| ||| |||||| || ||| ||| ||| | | | | Sbjct 1636 ATGGGAACAATTCCATTTGAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGA 1577 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | || |||| | |||||||| ||||| |||||| || ||||| | Sbjct 1576 ATGCGGTGAATGTTGAGACCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTC 1517 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 | || | || ||||| | ||| ||| ||||| | |||| || |||||| | | Sbjct 1516 AACGTGTCGTAAATACCCTCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCC 1457 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 ||||| ||| || ||||||||||||||||| || || | |||||| |||| | Sbjct 1456 ATCTGAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTC 1397 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 |||||||| | || ||||| | ||| || | || ||||| || || || | Sbjct 1396 TGGGACATGAGATTATAGGTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAACA 1337 Query 107285 GCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA 107344 || |||||||| | ||||| ||| || ||| | |||||| || || | ||| Sbjct 1336 GCAACACGCATGATCATGTGTTGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAGA 1277 Query 107345 TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 || | ||| |||||||||| || ||||| Sbjct 1276 TAAGACCGCTCCAGGGTTTTGAATCCGAAGTA 1245 Score = 82.4 bits (90), Expect = 9e-11 Identities = 131/185 (71%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG---TACTCTAAAATT 106519 || || || |||||||||||||| || ||||| | | | | || || | || Sbjct 2227 GCAATAGACGCCAAATTGCAAACCGCTACTTCATC--TGGC-GAGCAATATTCAATGATC 2171 Query 106520 TCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTG 106579 || || |||| ||| || || | || || ||||| ||||||||||| ||||| |||||| Sbjct 2170 TCGGTGCACAGGTTAGAGCTTCTGATTGTGCCCAAGTTCTTTTGGTTGCTCTTCTTGTTG 2111 Query 106580 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCC 106639 ||||| || ||||| ||||| | || | || ||||| ||||| | | ||||| || Sbjct 2110 CACGCGTCTTTGTAAAGCATAAACGGGTTACCGGTCTCAGTCTGAGCTTCAAGAATGGCA 2051 Query 106640 TTCCA 106644 | ||| Sbjct 2050 TACCA 2046 >seq426 Length=8128 Score = 89.7 bits (98), Expect = 6e-13 Identities = 324/499 (65%), Gaps = 10/499 (2%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| ||||||||||||||||||||||| ||| | || ||||| ||||| Sbjct 5307 TAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTGTCCATG 5248 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA-AATGGGTGGCACCCCAACTTGTTTGAGGAGACG 117104 ||||||||||| ||| | | ||| | | | | | ||||| | |||||| || Sbjct 5247 AAGTCAAATGGGTTCGTGGAGTTGTAGACTTTCTTGTTGCCCAA-TGCAACGAGGAGGCG 5189 Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164 || | ||| |||| ||||| | |||| || | |||||| |||| || Sbjct 5188 GTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGTTCATTCCGAGAAGCGCGAC 5129 Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 117224 |||||| || || ||| |||| | | ||| ||| || ||||| | | ||| | Sbjct 5128 TGGGAGCGCATCTGAGAGGAACTCCTGCTCTATCGTGACGGCCTCAGTGATGATCCTCTC 5069 Query 117225 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTG 117284 | || || | ||||| | | || | |||||| ||| || || Sbjct 5068 AACAGCCTCTGGGGTGGGGCGGTGGCGGAGGTGGGAGAAGAGAAGACAGGCGAAATCAGT 5009 Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| | ||||| || || || ||||| || || || || || || |||||||| || Sbjct 5008 GTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAGCCCAGGCATGAGGCC 4949 Query 117345 CCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 || ||||| | ||| | |||| ||| || || || ||||||||| || || ||| Sbjct 4948 TCGTTTCTTGAGCCAGAAGATAGAAGCA-AAAGATCCACTGAAGAAGATGCCTTCAACAG 4890 Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGA--CTTTGT-GTCAAACCATTTCA 117460 ||| || || | ||||||| || | ||| ||| |||| | |||| ||| | Sbjct 4889 CCGCGAAGGCGACGAGGCGCTGTGCAA---AGCTAGATTCTTTATCCTCAATCCACCGGA 4833 Query 117461 TTGCCCATTTCGCCTTCTT 117479 | ||||| | |||||||| Sbjct 4832 TGGCCCAATCAGCCTTCTT 4814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589952274428320