Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1161 154 3e-32 seq602 98.7 2e-15 >seq1161 Length=5408 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || ||||| ||||| ||||| | ||| || | ||||| || Sbjct 3953 ACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCCTCA 4012 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || |||||||| |||||||| |||||||| || || || ||||||||||| Sbjct 4013 AGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 4072 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || ||||| |||||||| || || || || ||||| ||||| | || || Sbjct 4073 ATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTG 4132 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || |||| || || ||||| | |||||| Sbjct 4133 CCGGTCAGTGTCTTAACGAAGATCTGCATT 4162 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || | || |||||| ||| ||||| || ||||| |||| || || | ||| Sbjct 3719 CTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCA 3778 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| ||||||||||| || ||||| || || || |||||||| ||||| ||||| || Sbjct 3779 TCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTA 3838 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 || |||||||| ||| ||||| ||||| || || || || || ||||| || || | Sbjct 3839 TCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATG 3898 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||| ||||| ||||| | ||||| Sbjct 3899 GTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 132 bits (146), Expect = 1e-25 Identities = 105/126 (83%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||||||||| ||||| || |||||||||||||| | |||||| | || ||||| Sbjct 4488 AACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCTTC 4547 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || ||||| ||||| ||||| ||||| ||||| |||||||| |||||||| Sbjct 4548 CAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTG 4607 Query 195051 AATTTT 195056 ||| || Sbjct 4608 AATCTT 4613 >seq602 Length=25977 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| || | |||||| | ||||| ||| Sbjct 7940 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCG 7999 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || ||||| ||||| || || || || || |||||| Sbjct 8000 AGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCCTTGTCT 8056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109426615478756