Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 98.7 6e-16
>seq1161
Length=5408
Score = 98.7 bits (108), Expect = 6e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||| | |||| ||| || || || ||||| |||||||| | || |||| || || ||
Sbjct 3958 GTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTG 4017
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
||||||||| || || ||||||||||||||| | || | ||||| ||||| || ||
Sbjct 4018 TTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTT 4077
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
||| ||| | || | || | ||| || || | ||| || ||||| || ||
Sbjct 4078 GCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGT 4137
Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981
|| ||||| || |||||||||||
Sbjct 4138 CAGTGTCTTAACGAAGATCTGCAT 4161
Score = 87.8 bits (96), Expect = 1e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||||| || || |||||||| || || || ||||| | || | || ||
Sbjct 4488 AACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCTTC 4547
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| ||||| || || || || ||||||||||| | || | || ||||||||
Sbjct 4548 CAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTG 4607
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
|||||| || || | | || | ||||| | |||||| |||| || ||||| ||
Sbjct 4608 AATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACCTCGAGAGTGATGGTCTT 4667
Query 34952 TCCCGTGA 34959
|| ||||
Sbjct 4668 GCCGGTGA 4675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324618296366304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |