Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq426 114 1e-20 >seq426 Length=8128 Score = 114 bits (126), Expect = 1e-20 Identities = 180/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || || ||||||||||| || ||||| || || || || || | || || | || | Sbjct 4659 TCGGAGTGAATATTTTCCATCATGATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGTACC 4600 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380 || |||||||| | ||| | ||||||| || || || || || ||||| || || Sbjct 4599 TGAACTTCACTGCTAAAACGCTCGACCAGGTTCTCGTTGACAATGCCATCCGAGGCGGCG 4540 Query 19381 AAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAA 19437 |||||||| || ||||| ||||||| | ||||| | | ||| | |||||| Sbjct 4539 AAAAATGCCAAGACATGGGAGATAAAATATCGCTCATCGTCGTTCAATCTGTTGTTCCAA 4480 Query 19438 TCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTT 19497 || | || |||||| || | ||| | |||||| | ||||| || || ||||| ||||| Sbjct 4479 TCGTGAAGATCTTTCGAGAGATCAATTTCTTCTGCAGTCCAGAATGACGCCTCCGCTTTC 4420 Query 19498 TTATACATGTTCCATAT 19514 |||||||| | ||| || Sbjct 4419 TTATACATTTGCCAGAT 4403 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| || |||||| || | |||||||| | | || | || ||||||||||| | Sbjct 5023 ACAGGCGAAATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAG 4964 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 |||||||| || |||| ||| || | |||||| ||||||||||| |||||| ||||| Sbjct 4963 CCCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAA 4904 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139 || ||||| || || || || || || || | | | || | |||| || |||| | Sbjct 4903 GATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAAGCTAGATTCTTTATCCTC 4844 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTT 19169 |||||| | ||||||||||||||||| Sbjct 4843 AATCCACCGGATGGCCCAATCAGCCTTCTT 4814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562081622039520