Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq426 114 1e-20
>seq426
Length=8128
Score = 114 bits (126), Expect = 1e-20
Identities = 180/257 (70%), Gaps = 3/257 (1%)
Strand=Plus/Minus
Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320
|| || ||||||||||| || ||||| || || || || || | || || | || |
Sbjct 4659 TCGGAGTGAATATTTTCCATCATGATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGTACC 4600
Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380
|| |||||||| | ||| | ||||||| || || || || || ||||| || ||
Sbjct 4599 TGAACTTCACTGCTAAAACGCTCGACCAGGTTCTCGTTGACAATGCCATCCGAGGCGGCG 4540
Query 19381 AAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAA 19437
|||||||| || ||||| ||||||| | ||||| | | ||| | ||||||
Sbjct 4539 AAAAATGCCAAGACATGGGAGATAAAATATCGCTCATCGTCGTTCAATCTGTTGTTCCAA 4480
Query 19438 TCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTT 19497
|| | || |||||| || | ||| | |||||| | ||||| || || ||||| |||||
Sbjct 4479 TCGTGAAGATCTTTCGAGAGATCAATTTCTTCTGCAGTCCAGAATGACGCCTCCGCTTTC 4420
Query 19498 TTATACATGTTCCATAT 19514
|||||||| | ||| ||
Sbjct 4419 TTATACATTTGCCAGAT 4403
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019
||| || |||||| || | |||||||| | | || | || ||||||||||| |
Sbjct 5023 ACAGGCGAAATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAG 4964
Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079
|||||||| || |||| ||| || | |||||| ||||||||||| |||||| |||||
Sbjct 4963 CCCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAA 4904
Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139
|| ||||| || || || || || || || | | | || | |||| || |||| |
Sbjct 4903 GATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAAGCTAGATTCTTTATCCTC 4844
Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTT 19169
|||||| | |||||||||||||||||
Sbjct 4843 AATCCACCGGATGGCCCAATCAGCCTTCTT 4814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562081622039520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |