Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1161 122 7e-23 >seq1161 Length=5408 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || |||||||| || || || ||||| || ||||| |||| || || | |||| Sbjct 3722 AACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCT 3781 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 |||| |||||||| ||||| || | ||||| || || || ||||| ||||| ||||| Sbjct 3782 TCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCC 3841 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 |||||||| ||||| | || | ||| || || | || ||||| || |||| ||| Sbjct 3842 TGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTT 3901 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | ||||| || || |||||||| Sbjct 3902 TTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| | | ||| | ||| || ||||| ||||| || || || ||||||||||| | Sbjct 4469 TTCCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAG 4528 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | | || |||| ||||| || || || || | ||| || || ||||| | Sbjct 4529 AAAGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAG 4588 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | |||||||| || |||||||| || || || || | ||| ||| | || | Sbjct 4589 GGATGCCTTCCTTGTCTTGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAA 4648 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGT 101445 | || ||||||| || |||||||| Sbjct 4649 CCTCGAGAGTGATGGTCTTGCCGGT 4673 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGT-TCTGGC-ATCGTCCAATT 101324 || || || ||||| ||||| ||||| ||||| ||| ||| || ||| ||| || | || Sbjct 3959 TGGAGTGTGGATTCCTTTTGGATATTATAATC--CGAAAGTGTCCGGCCATCCTCAAGTT 4016 Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 | || || || || || | || || || || || || || || ||||| ||||| |||| Sbjct 4017 GTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTT 4076 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||| || | || | || || || | || ||||| || |||| |||||||||| Sbjct 4077 TGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGG 4136 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | | || || || || |||||||| Sbjct 4137 TCAGTGTCTTAACGAAGATCTGCAT 4161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396259718940876