Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1161 109 4e-19 >seq1161 Length=5408 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| |||| | || |||||| ||||| || |||||||| ||||| || ||||| || || Sbjct 3706 GCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3765 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | ||| | || |||| ||||||||| ||||| || || ||||| || || | ||| Sbjct 3766 GAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 3825 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || || ||||| || ||| || ||||| | | || || || ||| || Sbjct 3826 AATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAAC 3885 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || |||| ||||| || ||||||||||| Sbjct 3886 TTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380919642125364