Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq426 163 5e-35 seq295 105 1e-17 >seq426 Length=8128 Score = 163 bits (180), Expect = 5e-35 Identities = 303/441 (69%), Gaps = 13/441 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || | | ||||||||| || Sbjct 5311 CTGGTAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTGTC 5252 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| || ||||| | | ||| || || | ||| ||||| | || Sbjct 5251 CATGAAGTCAAATGGGTTCGTGGAGTTGTAGACTTTCTTGTT--GCCCAATGCAACGAGG 5194 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| | || ||||| |||||||||||| ||||||| || |||||| || | || Sbjct 5193 AGGCGGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGTTCATTCCGAGAAGC 5134 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | || || | || | || ||| ||||||| ||||||| ||||| || | ||| Sbjct 5133 GCGACTGGGAGCGCATCTGAGAGGAACTCCTGCTCTATCGTGACGGCCTCAGTGATGATC 5074 Query 48077 TGCTTAACGCGGGACTCTGAGG---GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 || ||| | ||||| || | || ||| ||||| || |||| | ||| Sbjct 5073 CTCTCAACA---GCCTCTGGGGTGGGGCGGTGGCGGAGGTG---GGAGAAGAGAAGACAG 5020 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || || || |||||||||| ||||| || ||| ||| |||| || || || ||| Sbjct 5019 GCGAAATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAGCCCA 4960 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | | ||||||||||| || | || ||||| ||| |||||||||| Sbjct 4959 GGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAAGATG 4900 Query 48254 CCCTCCACTGCCGCGAACGCG 48274 || || || |||||||| ||| Sbjct 4899 CCTTCAACAGCCGCGAAGGCG 4879 >seq295 Length=8791 Score = 105 bits (116), Expect = 1e-17 Identities = 505/792 (64%), Gaps = 27/792 (3%) Strand=Plus/Minus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917 ||||| ||| |||||| ||| || | | ||| ||| | || ||||||||| || Sbjct 2846 CATGTTGTCGGACCAGAGCCCCATGTCCACGAGGTCCTTCAGCAACCAAGGGTTGACAAT 2787 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || || | || || | | | ||| | || || ||||||||||| | || Sbjct 2786 CTGGAATTCGCCCGCCAGAACACGGCGCGAGTAGATATTAGAGGTGTAGGGCTCAAAGCA 2727 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 |||||| || || ||||| |||||||| || |||||||| || || || ||||| Sbjct 2726 TTCGTTGAAACCAAGGATCTGACTTGTGCTGGCAGTAGGCATGGGTGCAACAAGTAGACT 2667 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097 ||| | |||||| ||||| | || | | | | | ||||||| | |||| Sbjct 2666 GTTACGCACTCCATGCTCAGCAAT-ATCC-----TGTTTCAGCGAGTCCCA-ATCCCAG- 2615 Query 213098 CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCT 213157 ||||| | || |||||||||||| |||| | |||||| | || ||| Sbjct 2614 -AGGTCGGTAGGAGTGACATTCCACATGTCATACTGAAGGATGCCCTGAGAGACCGGGGA 2556 Query 213158 GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGC 213217 || | || | ||| || || || | |||||| ||||| |||||||| || Sbjct 2555 ACCTTCATAGGTGGAATAAGGCCCGTCGATCTTGGCTAGCTCACAGGACGCAGTCAAACT 2496 Query 213218 AGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAA 213277 |||| || || ||||| || || | |||| |||| || || || ||||| ||| Sbjct 2495 TGCGTGATAAATTGTTTCGAAAATTTGAATGTTCAGCTGTTTAGCTTCAGGGGAATCGAA 2436 Query 213278 GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG-ATGCCGATGGGTC 213336 || | || |||| ||||||| || ||||| || ||| ||| | || || | Sbjct 2435 TGGAAGTCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCGCATG-CAATAGGAC 2377 Query 213337 TGTGTCTCAGGTTAGACTTGGAGCAC-TCCTCCAAGGGGTAAAAGTTGCAGTCGATGATC 213395 ||||| | ||| | | | | | ||||| | || || |||| | |||||||| Sbjct 2376 GGTGTCGGAAGTT-GCTTCGCTTCGCTTCCTCGACTGGATAGTAGTTCCCATCGATGATT 2318 Query 213396 TTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACG 213455 ||||| ||||| || | | || | || || | | || | || || || | Sbjct 2317 TTGTTAAGGTTTCGAACGACAACCTGAGTTACTTCGTGGAGCTTGCCGAAATCATACTC- 2259 Query 213456 TAGCCCCCGTCC----TGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGC 213511 |||||| | | ||| || |||| || || |||| |||||||| || Sbjct 2258 ---CCCCCGGACGGGATCCACGAATGTGGGCAAAGCAATAGACGCCAAATTGCAAACCGC 2202 Query 213512 CACCTCCT---GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGAT 213568 || || | | ||| || || |||||||||||||||||||| || || ||| Sbjct 2201 TACTTCATCTGGCGAG---CAATATTCAATGATCTCGGTGCACAGGTTAGAGCTTCTGAT 2145 Query 213569 GGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGG 213628 ||||||| ||||| ||||| ||| |||| | || ||||| ||||| | || Sbjct 2144 TGTGCCCAAGTTCTTTTGGTTGCTCTTCTTGTTGCACGCGTCTTTGTAAAGCATAAACGG 2085 Query 213629 GGACCCGGTCTC 213640 | |||||||| Sbjct 2084 GTTACCGGTCTC 2073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931487760389120