Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq426 159 6e-34 seq295 116 7e-21 >seq426 Length=8128 Score = 159 bits (176), Expect = 6e-34 Identities = 304/448 (68%), Gaps = 9/448 (2%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| || ||||| || |||||||| ||||| || || ||||| | | Sbjct 4869 AGCGCCTCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCTA 4928 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCAT 25994 |||||||||||||| | | | || | |||||| ||||| ||| ||||| |||||||| || Sbjct 4929 TCTTCTGGCTCAAG-AAACGAGGCCTCATGCCTGGGCT-TACATTTTCTAACGAGCTTAT 4986 Query 25995 CAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCT 26054 | | |||||||| | |||| ||||| ||||| || |||| | | |||| | | Sbjct 4987 CTCTCGTGACGAGGGCTTGCACACTGATTTCGCCTGTCTTCTCTTCTC---CCACCTCCG 5043 Query 26055 CCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAA 26114 |||| || | | |||| | || | || ||||||| ||||| || ||| ||| | Sbjct 5044 CCACCGCCCCACCCCAGAGGCTGTTGAGAGGATCATCACTGAGGCCGTCACGATAGAGCA 5103 Query 26115 GGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAG 26174 |||||| | | || |||||| || |||||| | Sbjct 5104 GGAGTTCCTCTCAGATGCGCTCCCAGTCGCGCTTCTCGGAATGAACGCCAAGCTCATGTG 5163 Query 26175 CCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCT 26233 |||||||| |||| ||| || |||| || || || || |||| | | | ||| Sbjct 5164 TCAATACATCGAGTTTGTCGCTGACCGCCTCCTCGTTGCA-TTGGGCAACAAGAAAGTCT 5222 Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293 ||| | | ||||| || ||||| ||||| ||||| ||| | | || |||||||||| Sbjct 5223 ACAACTCCACGAACCCATTTGACTTCATGGACAACATCTCGCTAGCTGGCAAGACCAACT 5282 Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||||||| ||| | || |||||||| || Sbjct 5283 TCTTTGAGAAGCGTGTTGGCGACTACCA 5310 >seq295 Length=8791 Score = 116 bits (128), Expect = 7e-21 Identities = 325/493 (66%), Gaps = 8/493 (2%) Strand=Plus/Minus Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096 || |||||| || || || |||| || || |||||||||||| || || || || Sbjct 1832 CTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAGAGATCTCGGGCGCGAACTTCTTC 1773 Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156 | || | ||| || | || |||||||||||||| || || | |||||||||||| || Sbjct 1772 CTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAG 1713 Query 222157 ATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC 222216 ||| | || | ||| || || |||||||| || |||||||| || || | | Sbjct 1712 ATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCCCTGATCGACATATCTAGCGGTATT 1653 Query 222217 GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTA 222276 |||||| | ||| || | || || | ||| || || ||| || || ||| |||||| Sbjct 1652 GTTGAAAACGCGGAGCATGGGAACAATTCCATTTGAGGAACCATTCGTTCCCGCAATGTA 1593 Query 222277 CG---CACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGGC-GTGTTTCG 222332 | || || | ||| | | | || | || |||||||| || || ||| | Sbjct 1592 AGAGCCAGTACCACGAATGCGGTGAAT-GTTGAGA--CCAATACCACCAGCAGTCTTT-G 1537 Query 222333 AGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGT 222392 | |||| || || | || | ||||| || ||||| ||| ||| ||||| | | Sbjct 1536 AAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTCGATACTGTCTTCCTTCATAT 1477 Query 222393 TCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGAC 222452 | ||||| ||||| | |||||||| || || || || || || || || |||||| Sbjct 1476 CGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGGAG 1417 Query 222453 TGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGT 222512 ||||| || || | | ||||| |||| || ||||| | |||| | | | | Sbjct 1416 AAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGTCTCGATGACTTTCTCTACAT 1357 Query 222513 TGTCCCCGTGAAT 222525 ||||| ||||| Sbjct 1356 CATCCCCATGAAT 1344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928799890353920