Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 123 2e-22
>seq1161
Length=5408
Score = 123 bits (136), Expect = 2e-22
Identities = 125/163 (77%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || | ||||| ||| || || || ||| ||||||| |||||
Sbjct 4476 ACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGT 4535
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||||| || ||||||||||| |||||||||||||| || || ||||| || ||
Sbjct 4536 ACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCC 4595
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|||||||||||||||||| || || || || |||||||||
Sbjct 4596 TTCCTTGTCTTGAATCTTAGACTTAACCGCGTCGATAGTATCA 4638
Score = 113 bits (124), Expect = 3e-19
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
||||||||||| ||||| || ||||| ||| || | ||||||||| | || ||
Sbjct 3941 CGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTC 4000
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| | ||| |||||||| ||||| || || || || ||||| || || || || || ||
Sbjct 4001 CGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCC 4060
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAG 480730
|| |||||||| || || ||| || ||||| ||||| | | | | | ||| ||
Sbjct 4061 TCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGA-CTTCCAG 4119
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| |||||||| ||||| || ||||||||||| || ||
Sbjct 4120 GGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTG 4158
Score = 98.7 bits (108), Expect = 6e-15
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || |||||||| || || ||| || || ||||||||||| | ||
Sbjct 4168 ACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGACAAGGT 4227
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||| || |||||||| ||||| || |||||||| ||||| || || || ||
Sbjct 4228 GCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGGGATGCC 4287
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714
|||||||| || || || || ||| ||||| |||||||
Sbjct 4288 CTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGTATCAG 4331
Score = 86.0 bits (94), Expect = 4e-11
Identities = 113/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| || ||||| |||||||| || || || || || || || ||||| ||||||||
Sbjct 3778 ATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTT 3837
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735
|| ||||| || || || ||||||||||| | | | | || ||| || || |
Sbjct 3838 ATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAA-CTTCGAGTGTGA 3896
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| ||||| || || || |||||||| ||
Sbjct 3897 TGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTG 3930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268013282712464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |