Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 93.3 8e-14
>seq1161
Length=5408
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || || || || || | ||| | || || |||||||| ||
Sbjct 3932 ATACCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCC 3991
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | |||||||||||| || || | || || || || ||
Sbjct 3992 GAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGT 4051
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || ||||| ||||| |||||| |||| | || ||| ||||| || |||
Sbjct 4052 GGGATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCG 4111
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| || || |||||||| || || || || || || || || ||||||
Sbjct 4112 ACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 89.7 bits (98), Expect = 9e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || |||||||| | || | | ||| || | || || || ||||| || | | |
Sbjct 3752 ATGTTGTAGTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGC 3811
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|| || || || || || ||||| ||||| || ||||| | |||| || |||||||
Sbjct 3812 TGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTA 3871
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
||||| ||||||||| || || || ||||| || || || ||||| || || || |||
Sbjct 3872 TCGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGC 3931
Query 193359 AT 193360
||
Sbjct 3932 AT 3933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899610901709760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |