Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 104 3e-17
seq426 87.8 3e-12
>seq1161
Length=5408
Score = 104 bits (114), Expect = 3e-17
Identities = 123/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
||||| | ||||| || || |||||||| || || ||| |||||||| ||| ||
Sbjct 4374 AAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTGATACCATTGACAAT 4315
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || | |||||| || || || || ||||| || ||||| || ||| | |||| | |
Sbjct 4314 GTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGCAACGTCTGATCTTT 4255
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATAT 156004
|| || |||||||| |||||| | | || || || |||||||||||
Sbjct 4254 GCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATAT 4208
Score = 96.9 bits (106), Expect = 5e-15
Identities = 136/190 (72%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || || |||| ||| |||| || |||||||| || | |||||||| ||
Sbjct 4162 AATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTC 4103
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| ||| ||||| |||| ||||| ||||| ||||| || || || ||||| ||
Sbjct 4102 AGATACCATTGATAACGTTAAAAGCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCA 4043
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || | || | ||||| || || || || ||| | | || | || |||||||
Sbjct 4042 GCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATA- 3984
Query 156002 TATATCCAAA 156011
|||||||||
Sbjct 3983 -ATATCCAAA 3975
Score = 95.1 bits (104), Expect = 2e-14
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | ||||| |||| || ||||| || ||| | ||||| || ||
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||||| || | |||||| || ||||| ||||| || || ||||| ||
Sbjct 3873 GATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCAG 3814
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | || | ||| ||||||||||| |||||| | || | || || || ||
Sbjct 3813 CAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAAC 3754
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATT 156040
|| ||||| ||| || || ||||||||||| || ||
Sbjct 3753 AT--CCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTT 3716
>seq426
Length=8128
Score = 87.8 bits (96), Expect = 3e-12
Identities = 197/294 (67%), Gaps = 4/294 (1%)
Strand=Plus/Minus
Query 18414 CTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTT 18473
|||||| ||||| ||||| |||||||||| | || || | || || || || |||
Sbjct 4702 CTTTGGT-TCTTTGATATATGTGTCGATTAGGAGGGAGTAAGTCTCGGAGTGAATATTTT 4644
Query 18474 CCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAA 18533
|||| ||||| || | ||| || | | |||||| || |||| || || ||
Sbjct 4643 CCATCATGATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGTACCTGAACTTCACTGCTAA 4584
Query 18534 ATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACAT 18593
| | || |||| ||||| || || || || || | | |||||||||||||| ||||
Sbjct 4583 AACGCTCGACCAGGTTCTCGTTGACAATGCCATCCGAGGCGGCGAAAAATGCCAAGACAT 4524
Query 18594 ATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCCATTCATCTATATCTTTTG 18650
|| |||| | |||| || || | |||||||| || | | |||||| |
Sbjct 4523 GGGAGATAAAATATCGCTCATCGTCGTTCAATCTGTTGTTCCAATCGTGAAGATCTTTCG 4464
Query 18651 ATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704
| ||||||| |||||| | ||||| || || | || || | || |||||||
Sbjct 4463 AGAGATCAATTTCTTCTGCAGTCCAGAATGACGCCTCCGCTTTCTTATACATTT 4410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731836613988800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |