Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1161 104 3e-17 seq426 87.8 3e-12 >seq1161 Length=5408 Score = 104 bits (114), Expect = 3e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897 ||||| | ||||| || || |||||||| || || ||| |||||||| ||| || Sbjct 4374 AAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTGATACCATTGACAAT 4315 Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957 || || | |||||| || || || || ||||| || ||||| || ||| | |||| | | Sbjct 4314 GTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGCAACGTCTGATCTTT 4255 Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATAT 156004 || || |||||||| |||||| | | || || || ||||||||||| Sbjct 4254 GCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATAT 4208 Score = 96.9 bits (106), Expect = 5e-15 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || |||| ||| |||| || |||||||| || | |||||||| || Sbjct 4162 AATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTC 4103 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| ||||| |||| ||||| ||||| ||||| || || || ||||| || Sbjct 4102 AGATACCATTGATAACGTTAAAAGCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCA 4043 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| || | || | ||||| || || || || ||| | | || | || ||||||| Sbjct 4042 GCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATA- 3984 Query 156002 TATATCCAAA 156011 ||||||||| Sbjct 3983 -ATATCCAAA 3975 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | ||||| |||| || ||||| || ||| | ||||| || || Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| || | |||||| || ||||| ||||| || || ||||| || Sbjct 3873 GATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCAG 3814 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | || | ||| ||||||||||| |||||| | || | || || || || Sbjct 3813 CAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAAC 3754 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATT 156040 || ||||| ||| || || ||||||||||| || || Sbjct 3753 AT--CCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTT 3716 >seq426 Length=8128 Score = 87.8 bits (96), Expect = 3e-12 Identities = 197/294 (67%), Gaps = 4/294 (1%) Strand=Plus/Minus Query 18414 CTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTT 18473 |||||| ||||| ||||| |||||||||| | || || | || || || || ||| Sbjct 4702 CTTTGGT-TCTTTGATATATGTGTCGATTAGGAGGGAGTAAGTCTCGGAGTGAATATTTT 4644 Query 18474 CCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAA 18533 |||| ||||| || | ||| || | | |||||| || |||| || || || Sbjct 4643 CCATCATGATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGTACCTGAACTTCACTGCTAA 4584 Query 18534 ATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACAT 18593 | | || |||| ||||| || || || || || | | |||||||||||||| |||| Sbjct 4583 AACGCTCGACCAGGTTCTCGTTGACAATGCCATCCGAGGCGGCGAAAAATGCCAAGACAT 4524 Query 18594 ATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCCATTCATCTATATCTTTTG 18650 || |||| | |||| || || | |||||||| || | | |||||| | Sbjct 4523 GGGAGATAAAATATCGCTCATCGTCGTTCAATCTGTTGTTCCAATCGTGAAGATCTTTCG 4464 Query 18651 ATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704 | ||||||| |||||| | ||||| || || | || || | || ||||||| Sbjct 4463 AGAGATCAATTTCTTCTGCAGTCCAGAATGACGCCTCCGCTTTCTTATACATTT 4410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731836613988800