Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1161 111 3e-19 >seq1161 Length=5408 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || | || | || | || || |||||||||||| Sbjct 3932 ATACCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCC 3991 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || |||| || | |||||| || || ||||| | || || || || ||| Sbjct 3992 GAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGT 4051 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| ||||| |||| || ||| || | |||||| || Sbjct 4052 GGGATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCG 4111 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || || || ||||| || || | ||| |||| || ||||||||| Sbjct 4112 ACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || |||||||| | ||| ||| || ||| || || || || | ||| || |||| Sbjct 3722 AACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCT 3781 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 |||| || |||||||||||||| | | ||| || || || || || ||||| ||||| Sbjct 3782 TCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCC 3841 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || |||||| | ||||| || |||| ||| || || ||||| || || |||||| Sbjct 3842 TGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTT 3901 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || | ||||| | || |||||||| Sbjct 3902 TTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 104 bits (114), Expect = 5e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | || | ||| | ||| | || || |||||||||||| Sbjct 4160 ATTCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCA 4219 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| |||| || || || |||||||| | | || ||||| ||| Sbjct 4220 GACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGT 4279 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || |||||| | |||||||| || | ||| || ||||| Sbjct 4280 GGGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCC 4339 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521 || || | |||||||| || ||||||| ||||| Sbjct 4340 ACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTT 4374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984431210401800