Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 111 3e-19
>seq1161
Length=5408
Score = 111 bits (122), Expect = 3e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || | || | || | || || ||||||||||||
Sbjct 3932 ATACCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCC 3991
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| || |||| || | |||||| || || ||||| | || || || || |||
Sbjct 3992 GAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGT 4051
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| ||||| |||| || ||| || | |||||| ||
Sbjct 4052 GGGATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCG 4111
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| || || || ||||| || || | ||| |||| || |||||||||
Sbjct 4112 ACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384
|| |||||||| | ||| ||| || ||| || || || || | ||| || ||||
Sbjct 3722 AACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCT 3781
Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444
|||| || |||||||||||||| | | ||| || || || || || ||||| |||||
Sbjct 3782 TCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCC 3841
Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504
|| |||||| | ||||| || |||| ||| || || ||||| || || ||||||
Sbjct 3842 TGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTT 3901
Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || | ||||| | || ||||||||
Sbjct 3902 TTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 104 bits (114), Expect = 5e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||||| | || | ||| | ||| | || || ||||||||||||
Sbjct 4160 ATTCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCA 4219
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || || || |||| |||| || || || |||||||| | | || ||||| |||
Sbjct 4220 GACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGT 4279
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || || || |||||| | |||||||| || | ||| || |||||
Sbjct 4280 GGGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCC 4339
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|| || | |||||||| || ||||||| |||||
Sbjct 4340 ACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTT 4374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984431210401800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |