Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 100 5e-16
>seq1161
Length=5408
Score = 100 bits (110), Expect = 5e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||||||||| || | | || | || || | |||||| || || || || | ||
Sbjct 3980 ATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGT 4039
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| ||||| || || ||||| ||||| ||||| |||| || ||| || |||
Sbjct 4040 TGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTA 4099
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
||||| || ||||| || || || ||||| || || | ||| |||| ||| ||||||
Sbjct 4100 TCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGC 4159
Query 172068 ATT 172070
|||
Sbjct 4160 ATT 4162
Score = 95.1 bits (104), Expect = 2e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| |||| || ||||||||||| || | | ||| ||||| || || || ||||| |||
Sbjct 3779 TCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTA 3838
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| || |||||| | ||||| || |||||||| || || ||||| || || |||
Sbjct 3839 TCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATG 3898
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || | ||||| | ||| ||||||||
Sbjct 3899 GTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||||||||| || || | || | || |||| || || || ||||| || | |
Sbjct 4207 AATATTATAATCAGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACG 4266
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
|| || || ||||| || || || || || || |||||| | |||||||| || ||
Sbjct 4267 TTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGT 4326
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || ||||| || || | |||||||| || ||||||| ||||| | || | | ||
Sbjct 4327 ATCAGAAGATTCCACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACGACTGTGTG 4386
Query 172067 CAT 172069
|||
Sbjct 4387 CAT 4389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905092236674400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |