Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1161 100 5e-16 >seq1161 Length=5408 Score = 100 bits (110), Expect = 5e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| || | | || | || || | |||||| || || || || | || Sbjct 3980 ATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGT 4039 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| ||||| || || ||||| ||||| ||||| |||| || ||| || ||| Sbjct 4040 TGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTA 4099 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| || ||||| || || || ||||| || || | ||| |||| ||| |||||| Sbjct 4100 TCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGC 4159 Query 172068 ATT 172070 ||| Sbjct 4160 ATT 4162 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| || ||||||||||| || | | ||| ||||| || || || ||||| ||| Sbjct 3779 TCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTA 3838 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || |||||| | ||||| || |||||||| || || ||||| || || ||| Sbjct 3839 TCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATG 3898 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || | ||||| | ||| |||||||| Sbjct 3899 GTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||| || || | || | || |||| || || || ||||| || | | Sbjct 4207 AATATTATAATCAGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACG 4266 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 || || || ||||| || || || || || || |||||| | |||||||| || || Sbjct 4267 TTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGT 4326 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || ||||| || || | |||||||| || ||||||| ||||| | || | | || Sbjct 4327 ATCAGAAGATTCCACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACGACTGTGTG 4386 Query 172067 CAT 172069 ||| Sbjct 4387 CAT 4389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905092236674400