Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1846 109 2e-18 seq587 86.0 2e-11 >seq1846 Length=21677 Score = 109 bits (120), Expect = 2e-18 Identities = 191/273 (70%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 ||||| ||||| || ||| || ||| || ||||| || ||||| ||||| |||||||| Sbjct 15546 CGCTGGATATATCCCGTTTCAGCTGTCTTGACAGCAGTGTCAATCAGACCCTCACGACCA 15487 Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAAC 302714 |||||||||||||||| | ||| | || ||| || || | | | | || | || || Sbjct 15486 GCCATAGCATGGAAGAAAAACTC-TGTGGGCGTAAGGCCACGGAGATACGAATTTTCGAC 15428 Query 302715 GAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC 302774 ||||||||| | |||||| |||| || ||| ||||| || |||| || | | | Sbjct 15427 GAAACCACGAGACTCGGGAGAATAATCATCCTTTGTAAAATGCGGCAAAGTACGATATTT 15368 Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTG 302834 | ||| |||| ||||| || || ||||| ||||| || | | | |||| || Sbjct 15367 GAAACCGAATGGAATACGTTTGCCTTCAACAGATTGCTGGCCAACAACAGCAGTCATTTG 15308 Query 302835 CGAAATATTTA-AATCACTGCCCTTGGAGCCAG 302866 || ||||| | |||| |||||| || |||| Sbjct 15307 AGAGATATTGATAATC-GAGCCCTTTGAACCAG 15276 Score = 102 bits (112), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| |||||||| |||||||||| Sbjct 16344 AGAATTTCCTTCAGACGAGGCACACCAAGGGTAACGTT---CTTGGACGAAACACCAGCA 16288 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| || |||| || | || || | ||||||||||| |||||| || | Sbjct 16287 AAATGGAATGTGTTCAACGTCATCTGTGTTGCCGGCTCACCAATTGATTGTGCAGCCAAG 16228 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| ||||| Sbjct 16227 ACACCAACCATTTCACCTGG 16208 >seq587 Length=7355 Score = 86.0 bits (94), Expect = 2e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 354015 GGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAAC 354074 |||||| | || || ||||| ||||||||||| || || |||||||| |||| || | Sbjct 3572 GGCGAGGCCGCCTAGAGAGTCGCGGTCGAGGAAGTTGGTGGGTTCGTCTAGGACGAGGAG 3513 Query 354075 GTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134 |||||| | |||||||||| | || || || || || |||||||| ||||| || || Sbjct 3512 GTGCGGGTTATTCCACATTGCGCCGGCAAGGACGACTTTGACCTTCTGGCCGCCCGAGAG 3453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471744658559516