Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1063 127 2e-23 seq426 114 2e-19 seq219 96.9 4e-14 >seq1063 Length=5727 Score = 127 bits (140), Expect = 2e-23 Identities = 309/460 (67%), Gaps = 10/460 (2%) Strand=Plus/Minus Query 1852169 AATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCG 1852228 || ||||| ||||| ||| |||||||||||| ||||||||||| || |||| ||| || Sbjct 5259 AAGATCTTCCGCTGATCGACCCCGCCAAACTGCGCGTCGACGTCCAGATGCTCCTCATCC 5200 Query 1852229 AGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCTTGACC 1852288 || ||||||||||||||||||| | | || ||| ||| | ||| || Sbjct 5199 AGCGCCTGCATGAGCGGGTAGATTAGTCCGGACAACGGCGCATTGTCAACTTGCTTCACG 5140 Query 1852289 ACCTGAGCGGCGGCCT--TTTGCGCCGTGC-CGGTGCGCACGTGCGCCGC-GAGTCGGTA 1852344 |||| ||| |||||| || || ||||| |||| |||| ||| || ||| ||| | Sbjct 5139 ACCTCCGCGCCGGCCTTCTTGGCATCGTGCTCGGT---CACG-ACGCTGCTGAGGCGGAA 5084 Query 1852345 GAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCGAGTCC 1852404 ||||| | | ||| | | |||||| ||| |||| | || ||||||||| Sbjct 5083 TAGGTCCATGGTGTATTTAGGGGAGAGCTGGTAGTCGCTGCCAAGGACGAACTCGAGTTT 5024 Query 1852405 GCCCAGCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCA-GCGGC 1852463 | | || ||| |||| | ||| | ||| ||||| | | ||| | ||| Sbjct 5023 CTCGATGGGGACGTGGATGGCTTCGAGGAGGGCGGTGATGACGTAGCGGTAGTATTTGGC 4964 Query 1852464 ACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGTCGG 1852523 | | ||| ||| ||||| |||| ||| |||||||||| | |||| | ||| | Sbjct 4963 GCGGAAGTT-GACGAGGTCGATGGGCGCTTTGAGGTTGTCGAGGAAGCCGTGGATGTCTG 4905 Query 1852524 CAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGGCA 1852583 | | |||||| ||||| | ||||| || |||| |||| ||| ||||| | |||||| Sbjct 4904 CGAGGAGGATTTTGACATGGCAGCCTGCGCGGAGGAAGTGGGCGAGTTTTACGATGGGGC 4845 Query 1852584 CAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCC 1852623 |||||||| ||| ||| ||| || | || ||||| Sbjct 4844 AGAAGTAGCCGCAGTGTGGGCGGCCGGTTGTTGCGGTGCC 4805 >seq426 Length=8128 Score = 114 bits (126), Expect = 2e-19 Identities = 176/247 (71%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| || ||| ||| || |||||||||||||| | |||||||| Sbjct 5316 GCCTTCTGGTAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCTAGCGAGATG 5257 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAG---TGCTTTTCGCATCCGA-GCGA 868806 ||||| | || ||||| | | |||||| | ||| | || || | || | Sbjct 5256 TTGTCCATGAAGTCAAATGGGTTCGTGGAGTTGTAGACTTTCTTGTTGC--CCAATGCAA 5199 Query 868807 CGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 || || |||||||| ||||||||||||||||| || |||||||| ||||||||| || Sbjct 5198 CG--AGGAGGCGGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGTTCATTCC 5141 Query 868867 GATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 || ||||| || || |||| || | ||||| | ||| ||| ||||||||| Sbjct 5140 GAGAAGCGCGACTGGGAGCGCATCTGAGAGGAACTCCTGCTCTATCGTGACGGCCTCAGT 5081 Query 868927 GATGATC 868933 ||||||| Sbjct 5080 GATGATC 5074 >seq219 Length=9298 Score = 96.9 bits (106), Expect = 4e-14 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||| || || ||| | || ||||| |||| |||||| | || || || Sbjct 1766 GCTGCCAACTACCTTGATATTAAGGCCCTTCTCGACATTGGTTGCAAGACCGTCGCAAAT 1825 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||| ||||| || || || |||||||||||||| || ||| Sbjct 1826 ATGATCAAGGGAAAGTCTCCAGAAGATATCCGCAAGACCTTCAATATC 1873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106821773806156