Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1161 132 4e-26 seq849 89.7 5e-13 >seq1161 Length=5408 Score = 132 bits (146), Expect = 4e-26 Identities = 156/206 (76%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || ||||| |||||||| || || ||||| || | | Sbjct 4161 ATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTCA 4102 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||||| ||| |||||||||||||| || || || || || || Sbjct 4101 GATACCATTGATAACGTTAAAAGCAAA-ATCCAAGACAAAGAGGGTATCCCACCAGACCA 4043 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATT-CGAGAAACATGTCAGATTATA 24881 ||||| | ||||| ||||| ||||| || |||||| | || || | || ||||||| Sbjct 4042 GCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTT-TCGGATTATA 3984 Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907 | || ||||||||||| ||||| ||| Sbjct 3983 ATATCCAAAAGGAATCCACACTCCAC 3958 Score = 111 bits (122), Expect = 1e-19 Identities = 141/193 (73%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| ||||| || || || ||||| | || || ||| | | || || | || | Sbjct 4374 AAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTGATACCATTGACAAT 4315 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 ||||| || ||||| ||||| || || || || || ||||| |||||| |||||||| Sbjct 4314 GTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGCAACGTCTGATCTTT 4255 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || |||||||| ||| | | | |||| |||||||| ||||| ||||||||| Sbjct 4254 GCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATATTCAGAAGGAATCG 4195 Query 24899 ACACTACA-CTTG 24910 || || || |||| Sbjct 4194 ACTCTCCATCTTG 4182 >seq849 Length=6452 Score = 89.7 bits (98), Expect = 5e-13 Identities = 128/177 (72%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || ||||| || || || || || || || || || ||| |||||| | || | Sbjct 1816 AAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGACACCATCGACAAT 1757 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || || ||||| ||||| || ||||| || ||||| || ||||| ||||||||| Sbjct 1756 GTCAAGAGCAAAATCCAGGACAAGGAGGGAATCCCACCCGACCAGCAACGGTTGATCTTT 1697 Query 24839 GCCGGGAAACAGCTGGAGGA-TTCGAGAAACAT-GTCAGATTATAACATTCAAAAGG 24893 ||||| || ||||| ||||| | || | | || |||||||||||||| |||| Sbjct 1696 GCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGT--GATTATAACATTCAGAAGG 1642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449875847451040