Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1063 136 6e-26 seq219 96.9 5e-14 >seq1063 Length=5727 Score = 136 bits (150), Expect = 6e-26 Identities = 310/459 (68%), Gaps = 8/459 (2%) Strand=Plus/Minus Query 2411512 AAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCG 2411571 |||||||| ||||| ||| |||||||||||| ||||||||||| || |||| ||| || Sbjct 5259 AAGATCTTCCGCTGATCGACCCCGCCAAACTGCGCGTCGACGTCCAGATGCTCCTCATCC 5200 Query 2411572 AGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCATCTTGACC 2411631 || ||||||||||||||||||| || | | ||||| ||| | ||| || Sbjct 5199 AGCGCCTGCATGAGCGGGTAGATTAGTCCGGACAACGGCGCATTGTCAACTTGCTTCACG 5140 Query 2411632 ACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCACG-CGCGCCGTCAGGCGCAAG 2411688 |||| ||| |||||| || || ||||| |||||||| ||| | | ||||| || Sbjct 5139 ACCTCCGCGCCGGCCTTCTTGGCATCGTGC--TCGGTCACGACGCTGC-TGAGGCGGAAT 5083 Query 2411689 AGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGA 2411748 ||||| | ||||| | | ||||||| |||||||| | || || ||||| Sbjct 5082 AGGTCCATGGTGTATTTAGGGGAGAGCTGGTAGTCGCTGCCAAGGACGAACTCGAGTTTC 5023 Query 2411749 TCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCAC 2411808 || | |||||| ||| | ||| | ||| ||||| | | ||| | | Sbjct 5022 TCGATGGGGACGTGGATGGCTTCGAGGAGGGCGGTGATGACGTAGCGGTAGTATTTGGCG 4963 Query 2411809 CGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCA 2411868 ||| | ||||||||| |||| ||| ||||||||| | |||| | ||| || Sbjct 4962 CGGAAGTTGACGAGGTCGATGGGCGCTTTGAGGTTGTCGAGGAAGCCGTGGATGTCTGCG 4903 Query 2411869 AAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACA 2411928 | |||||| | || | || || || |||| |||| ||| ||||| | |||||| Sbjct 4902 AGGAGGATTTTGACATGGCAGCCTGCGCGGAGGAAGTGGGCGAGTTTTACGATGGGGCAG 4843 Query 2411929 AAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCC 2411966 |||||||| ||| || || ||| || | |||||||| Sbjct 4842 AAGTAGCCGCAG-TGTGGGCGGCCGGTTGTTGCGGTGCC 4805 >seq219 Length=9298 Score = 96.9 bits (106), Expect = 5e-14 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||| || || ||| |||| ||||| | || ||||||||||| || || Sbjct 1766 GCTGCCAACTACCTTGATATTAAGGCCCTTCTCGACATTGGTTGCAAGACCGTCGCAAAT 1825 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | |||||||| ||||| || || || |||||||||||||| || ||| Sbjct 1826 ATGATCAAGGGAAAGTCTCCAGAAGATATCCGCAAGACCTTCAATATC 1873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915834943198052