Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 116 2e-21
seq602 107 1e-18
seq849 100 2e-16
>seq1161
Length=5408
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||| || || ||||| ||||| || | || ||||
Sbjct 3950 AGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCC 4009
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||| |||||||||||||| ||||||||||||||| | || | ||||| |||||
Sbjct 4010 TCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 4069
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| ||| ||| | || | || | |||||| || | ||| || ||
Sbjct 4070 TGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTT 4129
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || |||||||||||
Sbjct 4130 TTGCCGGTCAGTGTCTTAACGAAGATCTGCAT 4161
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| |||| |||||||| || | || | ||||||||||| || ||||| ||||| ||
Sbjct 3707 CCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 3766
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | || |||| ||||| ||||| || || ||||| || || ||||||||| | ||
Sbjct 3767 AGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGA 3826
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||| ||||| || | ||||| || ||| | || | || | ||| ||
Sbjct 3827 ATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACT 3886
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || ||||| || || || ||||| || || || ||||||||
Sbjct 3887 TCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 95.1 bits (104), Expect = 8e-15
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||||||||| ||||| || || | | |||| |||| ||||| |||||||| || |||
Sbjct 4199 TCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAG 4258
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893
||||| |||||||| ||| | || | ||||||||||| | |||||
Sbjct 4259 ATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATTTT 4305
>seq602
Length=25977
Score = 107 bits (118), Expect = 1e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 7937 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCC 7996
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| ||||||||||| | || | |||||||||||
Sbjct 7997 TCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCCTTGTC 8055
>seq849
Length=6452
Score = 100 bits (110), Expect = 2e-16
Identities = 135/186 (73%), Gaps = 8/186 (4%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||||||||||||||| || || | || | || || || ||||| ||||| ||||
Sbjct 1642 CCTTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 1701
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||||||||||| | || | ||||||||||| | ||||| ||||| ||
Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGAC--AT- 1758
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || ||| |||||| |||| || |||||||| ||||| ||||||||
Sbjct 1759 -TGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTG 1817
Query 34964 ACAAAG 34969
|| |||
Sbjct 1818 ACGAAG 1823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325677446434292
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |