Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1161 116 2e-21 seq602 107 1e-18 seq849 100 2e-16 >seq1161 Length=5408 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||| || || ||||| ||||| || | || |||| Sbjct 3950 AGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCC 4009 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| |||||||||||||| ||||||||||||||| | || | ||||| ||||| Sbjct 4010 TCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 4069 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||| ||| | || | || | |||||| || | ||| || || Sbjct 4070 TGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTT 4129 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| || ||||||||||| Sbjct 4130 TTGCCGGTCAGTGTCTTAACGAAGATCTGCAT 4161 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||| |||||||| || | || | ||||||||||| || ||||| ||||| || Sbjct 3707 CCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 3766 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| ||||| ||||| || || ||||| || || ||||||||| | || Sbjct 3767 AGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGA 3826 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||| ||||| || | ||||| || ||| | || | || | ||| || Sbjct 3827 ATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACT 3886 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || ||||| || || || ||||| || || || |||||||| Sbjct 3887 TCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 95.1 bits (104), Expect = 8e-15 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| ||||| || || | | |||| |||| ||||| |||||||| || ||| Sbjct 4199 TCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAG 4258 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893 ||||| |||||||| ||| | || | ||||||||||| | ||||| Sbjct 4259 ATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATTTT 4305 >seq602 Length=25977 Score = 107 bits (118), Expect = 1e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 7937 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCC 7996 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||||||||| ||||||||||| | || | ||||||||||| Sbjct 7997 TCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCCTTGTC 8055 >seq849 Length=6452 Score = 100 bits (110), Expect = 2e-16 Identities = 135/186 (73%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||||||||||||||| || || | || | || || || ||||| ||||| |||| Sbjct 1642 CCTTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 1701 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||||||||||| | || | ||||||||||| | ||||| ||||| || Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGAC--AT- 1758 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || ||| |||||| |||| || |||||||| ||||| |||||||| Sbjct 1759 -TGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTG 1817 Query 34964 ACAAAG 34969 || ||| Sbjct 1818 ACGAAG 1823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325677446434292