Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 96.9 5e-15
>seq1161
Length=5408
Score = 96.9 bits (106), Expect = 5e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| | | || | ||||| |||| || || || ||||| | || || ||| | |
Sbjct 4388 TGCACACAGTCGTCAAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTG 4329
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | |||||||| | |||||| || || || ||||| ||||| ||||| |
Sbjct 4328 ATACCATTGACAATGTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGC 4269
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | || || ||||| || || || | || ||| | || || | ||||||||||
Sbjct 4268 AACGTCTGATCTTTGCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATA 4209
Query 146212 TACAAAAAGAATCGACTATCCAT 146234
| || || ||||||||| |||||
Sbjct 4208 TTCAGAAGGAATCGACTCTCCAT 4186
Score = 84.2 bits (92), Expect = 3e-11
Identities = 142/203 (70%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090
|||| || ||| | || ||| | || || ||||| || || | || || || | | |
Sbjct 4160 TGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTCA- 4102
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||| ||| | || || |||| ||||| ||| ||||| || || ||||| || ||
Sbjct 4101 GATACCATTGATAACGTTAAAAGCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 4042
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
||| ||||||| || || || |||||| | || ||| | || | | |||||||||
Sbjct 4041 CAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATAAT 3982
Query 146211 ATACAAAAAGAATCGACTATCCA 146233
|| ||||| ||||| || ||||
Sbjct 3981 ATCCAAAAGGAATCCACACTCCA 3959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786128388854560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |