Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1161 123 2e-23 >seq1161 Length=5408 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||| | ||| || || | || || |||||||| ||||| || |||||||||| | Sbjct 3935 CCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAA 3994 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || |||||||| || || | || | || |||||| || || || Sbjct 3995 AGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGG 4054 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | ||| ||| || | || | || || || || ||| Sbjct 4055 ATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACT 4114 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || ||||||||||| || | || ||||| || ||||||||| Sbjct 4115 TCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385201040285388