Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 138 2e-27
>seq1161
Length=5408
Score = 138 bits (152), Expect = 2e-27
Identities = 173/232 (75%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | ||| || || ||||| || || ||||||||||| |
Sbjct 3933 TACCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCG 3992
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || || || ||||||||||| || ||||| |||| ||| || ||||| |
Sbjct 3993 AAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTG 4052
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGT-TC 82759
| || || || || ||||| || ||||||||| || || ||||| ||||| | || | ||
Sbjct 4053 GGATACCCTCTTTGTCTTGGAT-TTTGCTTTTAACGTTATCAATGGTATC-TGAGCTCTC 4110
Query 82760 TACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||||| || || || ||||| |||| ||||| || || |||||||||
Sbjct 4111 GACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 136 bits (150), Expect = 8e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | || ||||| ||||| ||||| |||||||||||||| | | | ||
Sbjct 4174 ACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCC 4233
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || || ||||| |||||||| || | ||| |||||||| || || || |||||
Sbjct 4234 ATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTT 4293
Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
|| || || ||| || |||||||| ||||| |||||| || ||| || ||||| || |
Sbjct 4294 GTCCTGGAT-TTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAA 4352
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || | || || || | | | |||||
Sbjct 4353 TGGTCTTGCCAGTTAGAGTTTTGACGACTGTGTGCAT 4389
Score = 132 bits (146), Expect = 9e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | ||| ||||| ||||| |||||||| || ||||| ||||| ||||||||
Sbjct 4471 CCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAA 4530
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | |||||||| || || |||||||| || || || | ||| || || |||||
Sbjct 4531 AGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGG 4590
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| ||||||||||| | || || || || |||||| | || ||
Sbjct 4591 ATGCCTTCCTTGTCTTGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACC 4650
Query 82764 TCCAAAGTTATCGTCTTGCCTGT 82786
|| | ||| || |||||||| ||
Sbjct 4651 TCGAGAGTGATGGTCTTGCCGGT 4673
Score = 105 bits (116), Expect = 1e-17
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | ||| | || ||||| || ||||| || || || || || || || ||
Sbjct 3707 CCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 3766
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | ||| ||||| || || || ||||||||||| || | || || ||||| ||
Sbjct 3767 AGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGA 3826
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGT-TCTA 82761
|| ||||||||||| ||||| ||| || ||||| || ||||| ||||| || | || |
Sbjct 3827 ATCCCTTCCTTATCCTGAAT-TTTACTCTTTACGTTGTCAATAGTATC-GGAGCTCTCAA 3884
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| | || || || ||||| |||| || || || || ||||||||
Sbjct 3885 CTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981778541871252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |