Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq295 109 5e-19
seq1161 105 6e-18
seq849 91.5 1e-13
>seq295
Length=8791
Score = 109 bits (120), Expect = 5e-19
Identities = 227/336 (68%), Gaps = 14/336 (4%)
Strand=Plus/Minus
Query 148638 AACGCGTCGGCAAGGCCCTGTACGCC-CACGCCAATGGGCCGGTGTTTAATGTTGGAGAG 148696
|| || || ||||| |||||||| || || || ||| || |||||| | |||| |
Sbjct 2416 AAAGCATCAGCAAGACCCTGTACACCGCATGC-AATAGGACGGTGTCGGAAGTTGCTTCG 2358
Query 148697 GCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCAC 148756
||| ||||| ||||||| ||| | |||||||| |||| ||| || || || ||
Sbjct 2357 CTTCGCTTCCTCGACTGGATAGTAGTTCCCATCGATGATTTTGTTAAGGTTTCGAACGAC 2298
Query 148757 CACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTC---------ATCTACGAT 148807
|||| || | | | | ||| | ||||| |||| | ||| ||||
Sbjct 2297 AACCTGAGTTACTTCGTGGAGCTTGCCGAAATCATACTCCCCCCGGACGGGATCCACGA- 2239
Query 148808 GCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTA 148867
|| | || || ||||| || | |||||| || || ||||| || | || ||
Sbjct 2238 --ATGTGGGCAAAGCAATAGACGCCAAATTGCAAACCGCTACTTCATCTGGCGAGCAATA 2181
Query 148868 CTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCT 148927
|| | |||||||| |||||| || || | |||| ||||| ||||||||| |||||
Sbjct 2180 TTCAATGATCTCGGTGCACAGGTTAGAGCTTCTGATTGTGCCCAAGTTCTTTTGGTTGCT 2121
Query 148928 CTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||| ||||||||||||| ||||| ||||| ||||
Sbjct 2120 CTTCTTGTTGCACGCGTCTTTGTAAAGCATAAACGG 2085
>seq1161
Length=5408
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| ||| || || || ||||| ||| | || ||| | || || ||
Sbjct 3728 AAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCA-TCTTCCAG 3786
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || | ||||| ||||||||||| || || || |||||||| || ||
Sbjct 3787 CTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAAT 3846
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| ||| | | |||| || |||| | ||| || |||| |||| |||||||||
Sbjct 3847 TTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCC 3906
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| ||||| ||||||||||||||
Sbjct 3907 GGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 89.7 bits (98), Expect = 5e-13
Identities = 126/175 (72%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|| ||||| ||||| ||||||||||| | || ||| ||| || |||||||| |
Sbjct 4501 GTAGACTCCTTCTGAATATTGTAATCAGAAAGAGT--ACGGCCGTCTTCCAGCTGCTTTC 4558
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| || || ||||||||||||||||||||||||||||| ||||| ||
Sbjct 4559 CAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGAATCTTAGACT 4618
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
| | | || | || || | ||| || |||| |||| ||| ||||||||
Sbjct 4619 TAACCGCGTCGATAGTATCACCTGACTCAACCTCGAGAGTGATGGTCTTGCCGGT 4673
Score = 86.0 bits (94), Expect = 6e-12
Identities = 142/201 (71%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521
||||| || || || ||||| ||||| | | ||| || ||||| || || || |
Sbjct 3965 GTGGATTCCTTTTGGATATTATAATC--CGAAAGTGTCCGGCCATCCTCAAGTTGTTTTC 4022
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| || |||||||| || ||||| || || ||||| ||| ||||||
Sbjct 4023 CGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGAT--TTTGCT 4080
Query 133582 TG--AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639
| | | |||| || || | | ||| || || | ||||| ||||||||||||||
Sbjct 4081 TTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGTCAG 4140
Query 133640 AGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||
Sbjct 4141 TGTCTTAACGAAGATCTGCAT 4161
>seq849
Length=6452
Score = 91.5 bits (100), Expect = 1e-13
Identities = 130/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 133473 TTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530
||||| || || ||||| | | ||| || || ||||| ||||||||||| || | |
Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCG--TCCTCAAGCTGCTTGCCGGCAAAGA 1701
Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590
| | ||| ||||||||||| ||||| || |||||||| ||| || ||||| | |
Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGT 1761
Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650
| | |||||| ||| ||| || || | |||| ||| ||||| || || || || ||||
Sbjct 1762 CGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 1821
Query 133651 A 133651
|
Sbjct 1822 A 1822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483397426604320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |