Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq295 109 5e-19 seq1161 105 6e-18 seq849 91.5 1e-13 >seq295 Length=8791 Score = 109 bits (120), Expect = 5e-19 Identities = 227/336 (68%), Gaps = 14/336 (4%) Strand=Plus/Minus Query 148638 AACGCGTCGGCAAGGCCCTGTACGCC-CACGCCAATGGGCCGGTGTTTAATGTTGGAGAG 148696 || || || ||||| |||||||| || || || ||| || |||||| | |||| | Sbjct 2416 AAAGCATCAGCAAGACCCTGTACACCGCATGC-AATAGGACGGTGTCGGAAGTTGCTTCG 2358 Query 148697 GCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCAC 148756 ||| ||||| ||||||| ||| | |||||||| |||| ||| || || || || Sbjct 2357 CTTCGCTTCCTCGACTGGATAGTAGTTCCCATCGATGATTTTGTTAAGGTTTCGAACGAC 2298 Query 148757 CACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTC---------ATCTACGAT 148807 |||| || | | | | ||| | ||||| |||| | ||| |||| Sbjct 2297 AACCTGAGTTACTTCGTGGAGCTTGCCGAAATCATACTCCCCCCGGACGGGATCCACGA- 2239 Query 148808 GCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTA 148867 || | || || ||||| || | |||||| || || ||||| || | || || Sbjct 2238 --ATGTGGGCAAAGCAATAGACGCCAAATTGCAAACCGCTACTTCATCTGGCGAGCAATA 2181 Query 148868 CTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCT 148927 || | |||||||| |||||| || || | |||| ||||| ||||||||| ||||| Sbjct 2180 TTCAATGATCTCGGTGCACAGGTTAGAGCTTCTGATTGTGCCCAAGTTCTTTTGGTTGCT 2121 Query 148928 CTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 ||| ||||||||||||| ||||| ||||| |||| Sbjct 2120 CTTCTTGTTGCACGCGTCTTTGTAAAGCATAAACGG 2085 >seq1161 Length=5408 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||| || || || ||||| ||| | || ||| | || || || Sbjct 3728 AAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCA-TCTTCCAG 3786 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | ||||| ||||||||||| || || || |||||||| || || Sbjct 3787 CTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAAT 3846 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | |||| || |||| | ||| || |||| |||| ||||||||| Sbjct 3847 TTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCC 3906 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||| |||||||||||||| Sbjct 3907 GGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/175 (72%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| ||||||||||| | || ||| ||| || |||||||| | Sbjct 4501 GTAGACTCCTTCTGAATATTGTAATCAGAAAGAGT--ACGGCCGTCTTCCAGCTGCTTTC 4558 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || || ||||||||||||||||||||||||||||| ||||| || Sbjct 4559 CAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGAATCTTAGACT 4618 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | | || | || || | ||| || |||| |||| ||| |||||||| Sbjct 4619 TAACCGCGTCGATAGTATCACCTGACTCAACCTCGAGAGTGATGGTCTTGCCGGT 4673 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 ||||| || || || ||||| ||||| | | ||| || ||||| || || || | Sbjct 3965 GTGGATTCCTTTTGGATATTATAATC--CGAAAGTGTCCGGCCATCCTCAAGTTGTTTTC 4022 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| || |||||||| || ||||| || || ||||| ||| |||||| Sbjct 4023 CGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGAT--TTTGCT 4080 Query 133582 TG--AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 | | | |||| || || | | ||| || || | ||||| |||||||||||||| Sbjct 4081 TTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGTTTTGCCGGTCAG 4140 Query 133640 AGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 4141 TGTCTTAACGAAGATCTGCAT 4161 >seq849 Length=6452 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||| || || ||||| | | ||| || || ||||| ||||||||||| || | | Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCG--TCCTCAAGCTGCTTGCCGGCAAAGA 1701 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | ||| ||||||||||| ||||| || |||||||| ||| || ||||| | | Sbjct 1702 TCAACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGT 1761 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | |||||| ||| ||| || || | |||| ||| ||||| || || || || |||| Sbjct 1762 CGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 1821 Query 133651 A 133651 | Sbjct 1822 A 1822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483397426604320