Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq295 174 4e-38 >seq295 Length=8791 Score = 174 bits (192), Expect = 4e-38 Identities = 458/693 (66%), Gaps = 11/693 (2%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || || || |||||||| || || || ||||| | ||||| |||||||| || | | Sbjct 1245 TACTTCGGATTCAAAACCCTGGAGCGGTCTTATCTGCTTCGAATCAATGGCAAGGTTGCT 1304 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||||| || ||||||||| | | |||||||| |||| |||||||| ||||| | | Sbjct 1305 GAACGCCCGCAACACATGATCATGCGTGTTGCTGTTGGAATTCATGGGGATGATGTAGAG 1364 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTAT---TCATGCTACTCCT 110480 || || || ||| || | | || | |||| | | ||| ||| |||| Sbjct 1365 AAAGTCATCGAGACCTATAATCTCAT--GTCCCA-GAAATTTTTCACTCACGCTTCTCCC 1421 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || || || || || || || | || |||||||||||||||| | | || Sbjct 1422 ACACTCTTCAATGCTGGTACCCCCCAACCTCAGATGGCTTCTTGCTTTCTCATCGATATG 1481 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 || || || ||| || |||||||| || | | ||| |||| | ||||| ||| Sbjct 1482 AAGGAAGACAGTATCGAGGGTATTTACGACACGTTGAAAACTTGTGCTTTGATTTC-AAA 1540 Query 110601 AACT-CTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 ||| |||| || |||||| | || |||| ||||| | || | | || || Sbjct 1541 GACTGCTGGTGGTATTGGTCTCAACATTCACCGCATTCGTGGTACTGGCTCTTACATTGC 1600 Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 | |||| ||| | |||| |||| ||||||| ||| | | || |||||| | || || Sbjct 1601 GGGAACGAATGGTTCCTCAAATGGAATTGTTCCCATGCTCCGCGTTTTCAACAATACCGC 1660 Query 110720 AAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACC 110776 | |||||| |||| || ||||| | | || | || ||||| |||||||| || Sbjct 1661 TAGATATGTCGATCAGGGAGGTAACAAGCGGCCAGGAGCTTTCGCTATTTATCTCGAGCC 1720 Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836 ||||| | ||||| ||||| || || || || ||||| || || || |||||| Sbjct 1721 GTGGCACACCGATATCTTTGAGTTTTTGGACCTCCGTAAGAACCATGGTAAGGAAGAAGT 1780 Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896 | || || ||| | ||| ||| | |||| | ||| | |||||||| |||||| | Sbjct 1781 TCGCGCCCGAGATCTCTTTCTTGCTCTCTGGACGCCCGATCTGTTCATGAAGCGTGTTGA 1840 Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956 | |||||| |||| |||| | || || || | || || | | ||||| || Sbjct 1841 GAAGAATGGCGAGTGGACTCTCTTTTGCCCCAATGAAGCGCCAGGCTTGGCAGATGTCTA 1900 Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 ||| |||||||||| | ||||||||||| || Sbjct 1901 TGGCGAAGAGTTTGATGCGCTTTACGAAAAGTA 1933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186753983041148