Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1161 111 1e-19 seq295 102 8e-17 >seq1161 Length=5408 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| | ||| || ||||| | | ||| ||||| |||||||||||| | || Sbjct 3713 CGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTC 3772 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| ||||| ||||| | | |||| || ||||| || ||||| || || ||| Sbjct 3773 CGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCT 3832 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || ||||| |||||| || | | || | |||||||| ||| ||||||| Sbjct 3833 TCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGT 3892 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| || ||||| ||||| | |||||||||||| Sbjct 3893 GTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 >seq295 Length=8791 Score = 102 bits (112), Expect = 8e-17 Identities = 231/345 (67%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 147271 AAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGC 147330 || ||||| || | |||||| | |||| | ||||| || || |||||| ||| Sbjct 2416 AAAGCATCAGCAAGACCCTGTACACCGCATGCAATAGGACGGTGTCGGAAGTTGCTTCGC 2357 Query 147331 TTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACA 147390 ||||| | | | ||||||| ||| | ||| || || ||||| ||||| || || ||| Sbjct 2356 TTCGCTTCCTCGACTGGATAGTAGTTCCCATCGATGATTTTGTTAAGGTTTCGAACGACA 2297 Query 147391 ACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCAT 147450 || | ||||| | | ||| || |||||||||| ||| || | ||| || Sbjct 2296 ACCTGAGTTACTTCGTGGAGCTTGCCGAAATCATACTCCCCCCGGACGGGATCCACGAAT 2237 Query 147451 TGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTG 147509 | || || |||||||||| |||||| || || || || |||| || || | Sbjct 2236 GTGGGCAAAGCAATAGACGCCAAATTGCAAACCGCTACTTCATCTGGCGA-GCAATATTC 2178 Query 147510 CACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTT 147569 | ||| |||| ||||||||| || | | || ||||| || | || ||||| || Sbjct 2177 AATGATCTCGGTGCACAGGTTAGAGCTTCTGATTGTGCCCAAGTTCTTTTGGTTGCTCTT 2118 Query 147570 CCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614 | ||||||||||||||| | ||||| |||| |||||||| Sbjct 2117 CTTGTTGCACGCGTCTTTGTAAAGCATAAACGGGTTACCGGTCTC 2073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476588155848480