Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 111 1e-19
seq295 102 8e-17
>seq1161
Length=5408
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
||||| | ||| || ||||| | | ||| ||||| |||||||||||| | ||
Sbjct 3713 CGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTC 3772
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| |||||| ||||| ||||| | | |||| || ||||| || ||||| || || |||
Sbjct 3773 CGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCT 3832
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| ||||| |||||| || | | || | |||||||| ||| |||||||
Sbjct 3833 TCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGT 3892
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||| || ||||| ||||| | ||||||||||||
Sbjct 3893 GTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
>seq295
Length=8791
Score = 102 bits (112), Expect = 8e-17
Identities = 231/345 (67%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 147271 AAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGC 147330
|| ||||| || | |||||| | |||| | ||||| || || |||||| |||
Sbjct 2416 AAAGCATCAGCAAGACCCTGTACACCGCATGCAATAGGACGGTGTCGGAAGTTGCTTCGC 2357
Query 147331 TTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACA 147390
||||| | | | ||||||| ||| | ||| || || ||||| ||||| || || |||
Sbjct 2356 TTCGCTTCCTCGACTGGATAGTAGTTCCCATCGATGATTTTGTTAAGGTTTCGAACGACA 2297
Query 147391 ACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCAT 147450
|| | ||||| | | ||| || |||||||||| ||| || | ||| ||
Sbjct 2296 ACCTGAGTTACTTCGTGGAGCTTGCCGAAATCATACTCCCCCCGGACGGGATCCACGAAT 2237
Query 147451 TGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTG 147509
| || || |||||||||| |||||| || || || || |||| || || |
Sbjct 2236 GTGGGCAAAGCAATAGACGCCAAATTGCAAACCGCTACTTCATCTGGCGA-GCAATATTC 2178
Query 147510 CACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTT 147569
| ||| |||| ||||||||| || | | || ||||| || | || ||||| ||
Sbjct 2177 AATGATCTCGGTGCACAGGTTAGAGCTTCTGATTGTGCCCAAGTTCTTTTGGTTGCTCTT 2118
Query 147570 CCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614
| ||||||||||||||| | ||||| |||| ||||||||
Sbjct 2117 CTTGTTGCACGCGTCTTTGTAAAGCATAAACGGGTTACCGGTCTC 2073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476588155848480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |