Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 93.3 4e-14
>seq1161
Length=5408
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA-AGCCAA 25233
||||| | || || || ||| | ||||| ||| | ||||| | |||||||| ||| |
Sbjct 4161 ATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTCA 4102
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||||| || || | || ||| ||||| || ||||||||||| || || || ||
Sbjct 4101 -GATACCATTGATAACGTTAAAAGCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCA 4043
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|||| ||||||| | || ||| |||||||| || |||| | | | ||||| ||
Sbjct 4042 GCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATAA 3983
Query 25354 TATTCAAAAAGAATCCAC 25371
||| ||||| ||||||||
Sbjct 3982 TATCCAAAAGGAATCCAC 3965
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || ||||| | ||||| ||| | ||||| ||||||| || | |
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|||||||| || | ||||| |||||| ||||| || || || || || || |||
Sbjct 3873 GATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCAG 3814
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| | ||||| | | || || || || ||||||| | | | || ||| |||||
Sbjct 3813 CAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAAC 3754
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| || ||| | ||||||||||| || ||| | || ||
Sbjct 3753 ATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTTGCGGGGTGG 3707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445072879685760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |