Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 120 3e-22
>seq1161
Length=5408
Score = 120 bits (132), Expect = 3e-22
Identities = 173/239 (72%), Gaps = 9/239 (4%)
Strand=Plus/Plus
Query 35503 TTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561
|||||| ||||| || ||||||||||| ||||| | || ||||||||||| |||||||
Sbjct 3699 TTTATTGGCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGT 3758
Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621
| |||| | || || | || |||||||||||||| ||||| || | ||||||||||
Sbjct 3759 AGTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGT 3818
Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---G 35677
| | |||| | ||||| ||| || || ||| | |||| | | || || |
Sbjct 3819 CTGGGGGAATCCCTTCCTTATCCTGAATTTTACTCTTTA-CGTTGTCAATAGTATCGGAG 3877
Query 35678 CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| || || || | ||||| ||||| || |||| |||||||| || ||||||||
Sbjct 3878 CTC---TCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| ||||| || ||||| | |||||| || | || ||||||||||| ||||||||
Sbjct 4199 TCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAG 4258
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||| || | || | || |||||||||| ||| || ||| | | |
Sbjct 4259 ATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTG 4318
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || || ||||||||||||| || || || || || || | |||||| ||
Sbjct 4319 TCAATGGTATCAGAAGATTCCACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACG 4378
Query 35726 AATATCTGCAT 35736
| | | |||||
Sbjct 4379 ACTGTGTGCAT 4389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450771804129440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |