Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1161 120 3e-22 >seq1161 Length=5408 Score = 120 bits (132), Expect = 3e-22 Identities = 173/239 (72%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 35503 TTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 |||||| ||||| || ||||||||||| ||||| | || ||||||||||| ||||||| Sbjct 3699 TTTATTGGCCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGT 3758 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 | |||| | || || | || |||||||||||||| ||||| || | |||||||||| Sbjct 3759 AGTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGT 3818 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---G 35677 | | |||| | ||||| ||| || || ||| | |||| | | || || | Sbjct 3819 CTGGGGGAATCCCTTCCTTATCCTGAATTTTACTCTTTA-CGTTGTCAATAGTATCGGAG 3877 Query 35678 CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || || || | ||||| ||||| || |||| |||||||| || |||||||| Sbjct 3878 CTC---TCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| || ||||| | |||||| || | || ||||||||||| |||||||| Sbjct 4199 TCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAG 4258 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||| || | || | || |||||||||| ||| || ||| | | | Sbjct 4259 ATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTG 4318 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || ||||||||||||| || || || || || || | |||||| || Sbjct 4319 TCAATGGTATCAGAAGATTCCACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACG 4378 Query 35726 AATATCTGCAT 35736 | | | ||||| Sbjct 4379 ACTGTGTGCAT 4389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450771804129440