Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1161 105 7e-18 seq295 91.5 1e-13 >seq1161 Length=5408 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560 |||||| | || || ||| |||||||| |||||||||||| | || || || Sbjct 3721 CAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATC 3780 Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620 || ||||| || || ||||| || | |||||||| || || || || ||||| || || Sbjct 3781 TTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATC 3840 Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680 |||||||| || || ||| | || ||||| || || ||||| || ||||| Sbjct 3841 CTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGT 3900 Query 134681 TTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| ||||| | ||||| |||||||| ||||| Sbjct 3901 TTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 >seq295 Length=8791 Score = 91.5 bits (100), Expect = 1e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 |||||| | ||| ||| | || ||||||| |||| ||||| ||||||||||| ||| Sbjct 2052 GCCATTCTTGAAGCTCAGACTGAGACCGGTAACCCGTTTATGCTTTACAAAGACGCGTGC 2111 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 ||| || ||||| |||| ||| ||||||| || | || || |||||| | || Sbjct 2112 AACAAGAAGAGCAACCAAAAGAACTTGGGCACAATCAGAAGCTCTAACCTGTGCACCGAG 2171 Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402 || | | || || |||| || ||||| || ||||||||| | ||||| Sbjct 2172 ATCATTGAATATTGCTCGCCAGATGAAGTAGCGGTTTGCAATTTGGCGTC 2221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505373963987360