Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 105 7e-18
seq295 91.5 1e-13
>seq1161
Length=5408
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560
|||||| | || || ||| |||||||| |||||||||||| | || || ||
Sbjct 3721 CAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATC 3780
Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620
|| ||||| || || ||||| || | |||||||| || || || || ||||| || ||
Sbjct 3781 TTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATC 3840
Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680
|||||||| || || ||| | || ||||| || || ||||| || |||||
Sbjct 3841 CTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGT 3900
Query 134681 TTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||| ||||| | ||||| |||||||| |||||
Sbjct 3901 TTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
>seq295
Length=8791
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292
|||||| | ||| ||| | || ||||||| |||| ||||| ||||||||||| |||
Sbjct 2052 GCCATTCTTGAAGCTCAGACTGAGACCGGTAACCCGTTTATGCTTTACAAAGACGCGTGC 2111
Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352
||| || ||||| |||| ||| ||||||| || | || || |||||| | ||
Sbjct 2112 AACAAGAAGAGCAACCAAAAGAACTTGGGCACAATCAGAAGCTCTAACCTGTGCACCGAG 2171
Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402
|| | | || || |||| || ||||| || ||||||||| | |||||
Sbjct 2172 ATCATTGAATATTGCTCGCCAGATGAAGTAGCGGTTTGCAATTTGGCGTC 2221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505373963987360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |