Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq295 206 4e-48 seq426 109 8e-19 >seq295 Length=8791 Score = 206 bits (228), Expect = 4e-48 Identities = 415/614 (68%), Gaps = 6/614 (1%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || || || || | ||||| |||| || || |||||| || || | | | | Sbjct 1915 TCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTC 1856 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 ||| | ||| | || ||| || ||||| || |||||||| |||| ||||| | |||| Sbjct 1855 CACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAG 1796 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA---AGATCGAGAAACTCC 69693 ||||||| || | | |||||| || || || || ||| || || | |||||| Sbjct 1795 AGATCTCGGGCGCGAACTTCTTCCTTACC---ATGGTTCTTACGGAGGTCCAAAAACTCA 1739 Query 69694 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCT 69753 | ||||| | ||||| || || ||||| || || | |||| || || || || ||| Sbjct 1738 AAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCT 1679 Query 69754 CCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTA 69813 |||||||| | ||||| || || || || | || | ||||| |||| ||| ||||| Sbjct 1678 CCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTT 1619 Query 69814 GATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGA 69873 || |||||| ||||| | ||| ||| || | | ||||| ||| ||| Sbjct 1618 GAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGA 1559 Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933 || || || || || | || || || | ||||||| |||||| ||||| || |||||| Sbjct 1558 CCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCC 1499 Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993 || || || || || |||| | | ||||| || || ||| ||| | || || Sbjct 1498 TCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTA 1439 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || | ||| ||||| ||||||||||| |||| | || | ||||| || Sbjct 1438 CCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAG 1379 Query 70054 GTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATA 70113 || || || || |||| ||| | ||||||||| | || |||||||| | ||| Sbjct 1378 GTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATG 1319 Query 70114 TGCTGAGGTCGTTC 70127 || || || ||||| Sbjct 1318 TGTTGCGGGCGTTC 1305 >seq426 Length=8128 Score = 109 bits (120), Expect = 8e-19 Identities = 150/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 |||||||| ||| || | |||||| || | | || | |||||||||||||| || Sbjct 5022 CAGGCGAAATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAGC 4963 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| || || || || |||||||| || || | ||||||||||||| |||||| Sbjct 4962 CCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAAG 4903 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TGT 39793 |||||||| || || || || || || || | || | | | || | || ||| | Sbjct 4902 ATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAAGCTAGATTCTTTATCCTCA 4843 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTT 39822 |||||| ||||||||||| ||||| Sbjct 4842 ATCCACCGGATGGCCCAATCAGCCTTCTT 4814 Score = 98.7 bits (108), Expect = 1e-15 Identities = 198/293 (68%), Gaps = 3/293 (1%) Strand=Plus/Minus Query 39878 TCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCC 39937 ||||| | |||||| || |||| || || | || || || || ||||| ||| Sbjct 4695 TCTTTGATATATGTGTCGATTAGGAGGGAGTAAGTCTCGGAGTGAATATTTTCCATCATG 4636 Query 39938 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCC 39997 ||||| || || || || || | || |||| | || || || | ||| | || Sbjct 4635 ATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGTACCTGAACTTCACTGCTAAAACGCTCG 4576 Query 39998 GCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATA 40057 ||| || || || || || ||||| ||||| ||||||||||| ||||| ||| Sbjct 4575 ACCAGGTTCTCGTTGACAATGCCATCCGAGGCGGCGAAAAATGCCAAGACATGGGAGATA 4516 Query 40058 AAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCATTGATATCTTTTGATATATCT 40114 |||||| |||||| ||||| || ||||| || | | |||||| || | ||| Sbjct 4515 AAATATCGCTCATCGTCGTTCAATCTGTTGTTCCAATCGTGAAGATCTTTCGAGAGATCA 4456 Query 40115 ACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167 | |||||| || ||||| || |||||||| || || || ||||| | ||| || Sbjct 4455 ATTTCTTCTGCAGTCCAGAATGACGCCTCCGCTTTCTTATACATTTGCCAGAT 4403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686875587959520