Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq295 206 4e-48
seq426 109 8e-19
>seq295
Length=8791
Score = 206 bits (228), Expect = 4e-48
Identities = 415/614 (68%), Gaps = 6/614 (1%)
Strand=Plus/Minus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
|| || || || || | ||||| |||| || || |||||| || || | | | |
Sbjct 1915 TCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTC 1856
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
||| | ||| | || ||| || ||||| || |||||||| |||| ||||| | ||||
Sbjct 1855 CACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAG 1796
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA---AGATCGAGAAACTCC 69693
||||||| || | | |||||| || || || || ||| || || | ||||||
Sbjct 1795 AGATCTCGGGCGCGAACTTCTTCCTTACC---ATGGTTCTTACGGAGGTCCAAAAACTCA 1739
Query 69694 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCT 69753
| ||||| | ||||| || || ||||| || || | |||| || || || || |||
Sbjct 1738 AAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCT 1679
Query 69754 CCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTA 69813
|||||||| | ||||| || || || || | || | ||||| |||| ||| |||||
Sbjct 1678 CCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTT 1619
Query 69814 GATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGA 69873
|| |||||| ||||| | ||| ||| || | | ||||| ||| |||
Sbjct 1618 GAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGA 1559
Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933
|| || || || || | || || || | ||||||| |||||| ||||| || ||||||
Sbjct 1558 CCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCC 1499
Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993
|| || || || || |||| | | ||||| || || ||| ||| | || ||
Sbjct 1498 TCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTA 1439
Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053
|| ||||| || | ||| ||||| ||||||||||| |||| | || | ||||| ||
Sbjct 1438 CCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAG 1379
Query 70054 GTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATA 70113
|| || || || |||| ||| | ||||||||| | || |||||||| | |||
Sbjct 1378 GTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATG 1319
Query 70114 TGCTGAGGTCGTTC 70127
|| || || |||||
Sbjct 1318 TGTTGCGGGCGTTC 1305
>seq426
Length=8128
Score = 109 bits (120), Expect = 8e-19
Identities = 150/209 (72%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
|||||||| ||| || | |||||| || | | || | |||||||||||||| ||
Sbjct 5022 CAGGCGAAATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAGC 4963
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
|||||||| || || || || |||||||| || || | ||||||||||||| ||||||
Sbjct 4962 CCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAAG 4903
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TGT 39793
|||||||| || || || || || || || | || | | | || | || ||| |
Sbjct 4902 ATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAAGCTAGATTCTTTATCCTCA 4843
Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTT 39822
|||||| ||||||||||| |||||
Sbjct 4842 ATCCACCGGATGGCCCAATCAGCCTTCTT 4814
Score = 98.7 bits (108), Expect = 1e-15
Identities = 198/293 (68%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 39878 TCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCC 39937
||||| | |||||| || |||| || || | || || || || ||||| |||
Sbjct 4695 TCTTTGATATATGTGTCGATTAGGAGGGAGTAAGTCTCGGAGTGAATATTTTCCATCATG 4636
Query 39938 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCC 39997
||||| || || || || || | || |||| | || || || | ||| | ||
Sbjct 4635 ATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGTACCTGAACTTCACTGCTAAAACGCTCG 4576
Query 39998 GCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATA 40057
||| || || || || || ||||| ||||| ||||||||||| ||||| |||
Sbjct 4575 ACCAGGTTCTCGTTGACAATGCCATCCGAGGCGGCGAAAAATGCCAAGACATGGGAGATA 4516
Query 40058 AAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCATTGATATCTTTTGATATATCT 40114
|||||| |||||| ||||| || ||||| || | | |||||| || | |||
Sbjct 4515 AAATATCGCTCATCGTCGTTCAATCTGTTGTTCCAATCGTGAAGATCTTTCGAGAGATCA 4456
Query 40115 ACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167
| |||||| || ||||| || |||||||| || || || ||||| | ||| ||
Sbjct 4455 ATTTCTTCTGCAGTCCAGAATGACGCCTCCGCTTTCTTATACATTTGCCAGAT 4403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686875587959520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |