Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq426 104 2e-17
>seq426
Length=8128
Score = 104 bits (114), Expect = 2e-17
Identities = 216/311 (69%), Gaps = 13/311 (4%)
Strand=Plus/Plus
Query 43715 ATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCA 43774
||||||||| | || ||||||||||| || ||||| |||||||||| ||||| |||
Sbjct 4392 ATTCAATAT----AGATCTGGCAAATGTATAAGAAAGCGGAGGCGTCATTCTGGACTGCA 4447
Query 43775 GAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGG-ATTGCA-TTAAAACCAC-AAG 43829
|||||| ||||| | | ||||| ||| ||| ||||| | || | ||| || | |
Sbjct 4448 GAAGAAATTGATCTCTCGAAAGATCTT--CACGATTGGAACAACAGATTGAACGACGATG 4505
Query 43830 AAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATG 43889
| | ||||||| || || ||||| ||||| || || || || || ||||| |
Sbjct 4506 AGCGATATTTTATCTCCCATGTCTTGGCATTTTTCGCCGCCTCGGATGGCATTGTCAACG 4565
Query 43890 AAAATTTGGTTAGTCGGTTTGCGCA-AGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948
| || ||| | | |||| ||| |||||||| |||| || || || || || |||
Sbjct 4566 AGAACCTGG-TCGAGCGTTTTAGCAGTGAAGTTCAGGTACCTGAGGCTCGCTGCTTCTAT 4624
Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACG 44008
|| || || || || ||||||||||| || || | ||| || || || || ||
Sbjct 4625 GGCTTCCAGATCATGATGGAAAATATTCACTCCGAGACTTACTCCCTCCTAATCGACACA 4684
Query 44009 TACATCAAAGA 44019
|| ||||||||
Sbjct 4685 TATATCAAAGA 4695
Score = 87.8 bits (96), Expect = 1e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 44120 TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTT 44179
|||| | | || || ||||| || || | ||| |||||||| ||||| ||||| |||
Sbjct 4862 TTTGCACAGCGCCTCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTT 4921
Query 44180 GCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAG 44239
|| | || || ||| | ||||||||||| | ||||||||| | || ||||| || |||
Sbjct 4922 GCTTCTATCTTCTGGCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAG 4981
Query 44240 TTAATAAGTCGTGATGAAGGCTTACA 44265
| || |||||| || ||||| ||
Sbjct 4982 CTTATCTCTCGTGACGAGGGCTTGCA 5007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397437263427340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |