Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq426 104 2e-17 >seq426 Length=8128 Score = 104 bits (114), Expect = 2e-17 Identities = 216/311 (69%), Gaps = 13/311 (4%) Strand=Plus/Plus Query 43715 ATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCA 43774 ||||||||| | || ||||||||||| || ||||| |||||||||| ||||| ||| Sbjct 4392 ATTCAATAT----AGATCTGGCAAATGTATAAGAAAGCGGAGGCGTCATTCTGGACTGCA 4447 Query 43775 GAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGG-ATTGCA-TTAAAACCAC-AAG 43829 |||||| ||||| | | ||||| ||| ||| ||||| | || | ||| || | | Sbjct 4448 GAAGAAATTGATCTCTCGAAAGATCTT--CACGATTGGAACAACAGATTGAACGACGATG 4505 Query 43830 AAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATG 43889 | | ||||||| || || ||||| ||||| || || || || || ||||| | Sbjct 4506 AGCGATATTTTATCTCCCATGTCTTGGCATTTTTCGCCGCCTCGGATGGCATTGTCAACG 4565 Query 43890 AAAATTTGGTTAGTCGGTTTGCGCA-AGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948 | || ||| | | |||| ||| |||||||| |||| || || || || || ||| Sbjct 4566 AGAACCTGG-TCGAGCGTTTTAGCAGTGAAGTTCAGGTACCTGAGGCTCGCTGCTTCTAT 4624 Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACG 44008 || || || || || ||||||||||| || || | ||| || || || || || Sbjct 4625 GGCTTCCAGATCATGATGGAAAATATTCACTCCGAGACTTACTCCCTCCTAATCGACACA 4684 Query 44009 TACATCAAAGA 44019 || |||||||| Sbjct 4685 TATATCAAAGA 4695 Score = 87.8 bits (96), Expect = 1e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 44120 TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTT 44179 |||| | | || || ||||| || || | ||| |||||||| ||||| ||||| ||| Sbjct 4862 TTTGCACAGCGCCTCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTT 4921 Query 44180 GCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAG 44239 || | || || ||| | ||||||||||| | ||||||||| | || ||||| || ||| Sbjct 4922 GCTTCTATCTTCTGGCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAG 4981 Query 44240 TTAATAAGTCGTGATGAAGGCTTACA 44265 | || |||||| || ||||| || Sbjct 4982 CTTATCTCTCGTGACGAGGGCTTGCA 5007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397437263427340