Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq295 147 3e-30 seq702 107 2e-18 >seq295 Length=8791 Score = 147 bits (162), Expect = 3e-30 Identities = 448/692 (65%), Gaps = 9/692 (1%) Strand=Plus/Minus Query 111464 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 111523 |||||| ||| || || |||||||| || || | || | | ||||| || | Sbjct 1933 TACTTTTCGTAAAGCGCATCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCA 1874 Query 111524 TCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGA 111583 | || || || |||| ||| | ||| | |||||| ||||||||||| || || || Sbjct 1873 TTGGGGCAAAAGAGAGTCCACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGC 1814 Query 111584 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643 |||| || | ||||||||||| ||| | ||||| | ||| ||||| || Sbjct 1813 GTCCAGAGAGCAAGAAAGAGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGG 1754 Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | || | ||||| | |||||| | |||||| ||||| ||||| | |||| || ||| Sbjct 1753 AGGTCCAAAAACTCAAAGATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCC- 1695 Query 111704 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 | | ||| || | |||| ||||| | || || ||| || ||||| ||| Sbjct 1694 --TGGCCGCTTGTTACCTCCCTGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGC 1637 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817 || |||| ||| |||| ||| |||||| || ||| ||| ||| | | | | Sbjct 1636 ATGGGAACAATTCCATTTGAGGAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGA 1577 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | || |||| | |||||||| ||||| |||||| || ||||| | Sbjct 1576 ATGCGGTGAATGTTGAGACCAATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTC 1517 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 | || | || ||||| | ||| ||| ||||| | |||| || |||||| | | Sbjct 1516 AACGTGTCGTAAATACCCTCGATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCC 1457 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 ||||| ||| || ||||||||||||||||| || || | |||||| |||| | Sbjct 1456 ATCTGAGGTTGGGGGGTACCAGCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTC 1397 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 |||||||| | || ||||| | ||| || | || ||||| || || || | Sbjct 1396 TGGGACATGAGATTATAGGTCTCGATGACTTTCTCTACATCATCCCCATGAATTCCAACA 1337 Query 112058 GCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA 112117 || || ||||||| ||||| || ||| ||| | |||||| || || | ||| Sbjct 1336 GCAACACGCATGATCATGTGTTGCGGGCGTTCAGCAACCTTGCCATTGATTCGAAGCAGA 1277 Query 112118 TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 || | ||| |||||||||| || ||||| Sbjct 1276 TAAGACCGCTCCAGGGTTTTGAATCCGAAGTA 1245 Score = 111 bits (122), Expect = 2e-19 Identities = 572/903 (63%), Gaps = 16/903 (2%) Strand=Plus/Minus Query 110525 ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG 110584 |||||||| || || ||| || |||||||| | ||| || | | || ||||| Sbjct 2938 ATTTCCCAGACAGTCTTATATAGCGCTTTGATATCGTGTGGTATGTTGGGAATGTTCTGA 2879 Query 110585 ATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644 || || || || || | || ||| ||||| | | ||||||||| || || | | Sbjct 2878 ATCGAGCCTCCATCCGCAATGATACGATTTTTCATGTTGTCGGACCAGAGCCCCATGTCC 2819 Query 110645 TTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTC 110704 |||||| || | | ||||||||| || || || || || | | | Sbjct 2818 ACGAGGTCCTTCAGCAACCAAGGGTTGACAATCTGGAATTCGCCCGCCAGAACACGGCGC 2759 Query 110705 AGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 110764 |||||| || | ||||| || ||||||||||| || ||| | ||| || ||| Sbjct 2758 GAGTAGATATTAGAGGTGTAGGGCTCAAAGCATTCGTTGAAACCAAGGATCTGACTTGTG 2699 Query 110765 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824 ||| || ||||| ||||| | | ||||||||||| | || | ||| || Sbjct 2698 CTGGCAGTAGGCATGGGTGCAACAAGTAGACTGTTACGCACTCCATGCTCAGCAATATCC 2639 Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 | || || ||||| || || | | | || | || |||| |||||||| |||| Sbjct 2638 TGTTTCAGCGAGTCCCAATCCCAGAGGTCGGTAGGAGTGACATTCC-ACATGTCATACTG 2580 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 ||| | || || || | || ||||| ||| |||| ||| | || | | | || Sbjct 2579 AAGGATGCCCTGAGAGACCGGGGAACCTTCATAGGTGGAATAAGGCCCGTCGATCTTGGC 2520 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | |||||| ||| || ||||||||| || ||||| || || || |||| Sbjct 2519 TAGCTCACAGGACGCAGTCAAACTTGCGTGATAAATTGTTTCGAAAATTTGAATGTTCAG 2460 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGAC 111062 || || |||||| ||||| |||| | || ||| | || || |||| || |||| Sbjct 2459 CTGTTTAGCTTCAGGGGAATCGAATG-GAAGTCGCAGAGCAAGGAAAGCATCAGCAAGAC 2401 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC---GCAGTCTCAA 111119 | || ||||| | ||||||| | |||||| | || ||||| || ||| | Sbjct 2400 CCTGTACACCGCATGCAATAGGACGGTGTCGGAAGTTGC---TTCGCTTCGCTTCCTCGA 2344 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 | ||||| | || | || |||| | ||| || ||| |||| || || | || Sbjct 2343 CTGGATAGTAGTTCCCATCGATGATTTTGTTAAGGTTTCGAACGACAACCTGAGTTACTT 2284 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239 | || || || | ||||| | | | || || | | || | || | Sbjct 2283 CGTGGAGCTTGCCGAAATCATACTCCCCCCGGACGGGATCCACGAATGTGGGCAAAGCAA 2224 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG---TACTCTAAAATTTCTG 111296 | || |||||||||||||| || ||||| | | | | || || | || || | Sbjct 2223 TAGACGCCAAATTGCAAACCGCTACTTCATC--TGGC-GAGCAATATTCAATGATCTCGG 2167 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 | || | ||| || || | || || ||||| ||||||||||| |||||||||||||||| Sbjct 2166 TGCACAGGTTAGAGCTTCTGATTGTGCCCAAGTTCTTTTGGTTGCTCTTCTTGTTGCACG 2107 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 | || ||||| ||||| | || | || ||||| ||||| | || ||||| || | || Sbjct 2106 CGTCTTTGTAAAGCATAAACGGGTTACCGGTCTCAGTCTGAGCTTCAAGAATGGCATACC 2047 Query 111417 AAA 111419 ||| Sbjct 2046 AAA 2044 >seq702 Length=25458 Score = 107 bits (118), Expect = 2e-18 Identities = 280/414 (68%), Gaps = 21/414 (5%) Strand=Plus/Plus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 ||||| || || || || | || || | |||||| ||||| || ||||| || | ||| Sbjct 6192 TCAAATCGGCCAGGCCGCAATAGCGCCTTATCAAGAATATCGACTCGATTCGTTCCAGCA 6251 Query 11513 ATAACCACAATGCCAGTCTC---ATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569 | ||| || | | || || | ||| |||||||||||||||||||| | |||||| Sbjct 6252 AGAACGACGA--CTTGT-TCGGAAGTGTTGAAGCCATCCATCTCGGTGAGAATTTGATTC 6308 Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCT--GGCATACCACCAGCACTGCGTTG----CTTG 11623 | ||| ||| | ||| || ||| | | |||| | | | | || | ||| Sbjct 6309 AGTGTGCTTTCCCGCTCGTCGTTTCCACCGCCATA--AGC-GTTTTTCGATCTCGACTTT 6365 Query 11624 CCCACCGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATTTC 11682 || | ||||||||||||||||| || | ||||| ||| || ||||| ||||| || | Sbjct 6366 CCAATAGCATCAATCTCATCAATAAATATGATACAAGGTGTGTTTTTC-CGGGCAGTTGC 6424 Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CG 11740 || ||||| || || | | || ||||| |||||||| || ||||| | | | Sbjct 6425 GAATAGATCACGGACTCGGGAAGGTCCAACACCGACAAACATTTCAACAAACTCAGAACC 6484 Query 11741 GCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800 || | | ||| | ||| || ||| ||| || || || | || || || | || Sbjct 6485 GCTCA-CGCTGTA-GAACGGAACACCTGACTCGCCAGCAGTAGCCTTTGCCAGTAATGTT 6542 Query 11801 TTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA 11854 || || |||||||| || | ||| | ||||||||| ||||||||||||||| Sbjct 6543 TTACCGGTACCTGGTGGTCCTGAGAGGATGGCGCCTCGAGGGATCTTGGCACCA 6596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628001634652800