Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 183 9e-41
seq368 179 1e-39
seq1846 123 8e-23
>seq1161
Length=5408
Score = 183 bits (202), Expect = 9e-41
Identities = 172/219 (79%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | | || |||||||| ||||| || || || ||||||||||||||
Sbjct 4159 CATTCCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATC 4218
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| || || || |||||||| || || ||||| |||||||| |||||||||||||| ||
Sbjct 4219 AGACAAGGTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGG 4278
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || ||||| |||||| |||||||| ||||| | |||||| | |||
Sbjct 4279 TGGGATGCCCTCCTTGTCCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTC 4338
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || | ||||| ||||| || ||||| ||||| ||
Sbjct 4339 CACCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGAC 4377
Score = 161 bits (178), Expect = 3e-34
Identities = 177/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | || ||||| || || || || || ||||| |||||||||||
Sbjct 3931 CATACCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATC 3990
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||| || ||||| |||||||||||||| || ||||| || |||||||| || ||
Sbjct 3991 CGAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGG 4050
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTT 140685
|| || || ||||| || || ||||| |||||| || |||||||| | ||| || |
Sbjct 4051 TGGGATACCCTCTTTGTCTTGGATTTT-GCTTTTAACGTTATCAATGGTATCTGAGCTCT 4109
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
| ||||| || || | || || ||||| ||||| || || || |||||||||
Sbjct 4110 CGACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 158 bits (174), Expect = 4e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
||||| || || || | || | ||| ||||| ||| ||||| || || || || ||
Sbjct 3707 CCACCCCGCAACCTCAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 3766
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| ||| || |||||||| || || || ||||||||||| || || ||||| || || |||
Sbjct 3767 AGTGTCCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGA 3826
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|| ||||| ||||||||||||||| ||||| || ||||| | ||| || ||||||
Sbjct 3827 ATCCCTTCCTTATCCTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACT 3886
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| | || || ||||| || ||||| || |||||||||||
Sbjct 3887 TCGAGTGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Score = 131 bits (144), Expect = 5e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| || ||||| | | ||||| | |||||||||||||| || |||||||| |||||
Sbjct 4467 CATTCCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATC 4526
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || || ||||| || || |||||||| || || ||||||||||| || ||
Sbjct 4527 AGAAAGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGG 4586
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || ||||| || || ||||| |||| || || || || | |||| || ||
Sbjct 4587 AGGGATGCCTTCCTTGTCTTGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTC 4646
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
||| || || || | ||||| |||||
Sbjct 4647 AACCTCGAGAGTGATGGTCTTGCCGGT 4673
>seq368
Length=8423
Score = 179 bits (198), Expect = 1e-39
Identities = 475/723 (66%), Gaps = 3/723 (0%)
Strand=Plus/Plus
Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261
||||| |||||||| ||||| || || || || || | | | | |||| ||| |
Sbjct 5942 ATAGGTATCGATTTGGGTACCACGTACTCCTGCGTGGGCATCTTCCGTGATGACCGTATC 6001
Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321
||||| ||||| || || || |||||| |||| || || || | |||||| || || ||
Sbjct 6002 GAAATCATTGCCAACGACCAGGGTAACCGAACCACTCCCTCGTTCGTTGCTTTCACAGAC 6061
Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381
|| || || | || |||||| | || || || |||| || || |||| || ||
Sbjct 6062 ACAGAACGCCTCATCGGTGATGCCGCGAAGAACCAAGTCGCCATGAACCCAACCAACACA 6121
Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441
|| || || || ||||| || ||||| | | || | ||| || |||||
Sbjct 6122 GTGTTCGACGCAAAGCGTCTCATTGGCCGCAAGTTCGCCGACCCTGAGGTTCAGTCTGAC 6181
Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501
| || || || || || | | || | | ||| | | | || | ||| | ||
Sbjct 6182 ATGAAGCACTTCCCCTTCAAGATCGT-CGACAAGGCCTCCA--AGCCTGTCATTCAAGTC 6238
Query 349502 GAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTT 349561
|| | || || || || | || || || ||||| || || ||||| |
Sbjct 6239 GAGTTCAAGGGCGAGACTAAGGAGTTCACTCCTGAGGAAATCTCCTCTATGGTCCTCACC 6298
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621
|| |||| || | ||| ||| | || | || | || || | |||| || | ||
Sbjct 6299 AAGATGAGAGAGACTGCCGAATCCTACCTTGGCGGCACTGTCAACAATGCCGTCGTCACC 6358
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
|| || || || || ||||| | |||||| || || || |||||||| ||||||
Sbjct 6359 GTCCCCGCTTACTTCAATGACTCACAGCGTCAAGCTACCAAGGATGCTGGTCTCATTGCC 6418
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741
|| | ||||| || | || ||||| || || ||||| || || ||||| || || |||
Sbjct 6419 GGCCTCAATGTCCTCCGTATCATTAACGAGCCTACTGCCGCTGCTATTGCTTACGGTCTT 6478
Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801
|| || | | ||| ||| ||| |||| ||||| || |||||||||||||||||
Sbjct 6479 GACAAGAAGGCTGATGGCGAACGCAATGTTCTCATTTTCGACTTAGGTGGTGGTACTTTC 6538
Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861
||||| || || || || | |||||||| || ||||| || || | || || ||||||
Sbjct 6539 GATGTTTCCCTCCTCACCATCGAAGAGGGTATCTTTGAGGTCAAGTCCACCGCCGGTGAT 6598
Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT 349921
|| || | ||||| || || ||||| || || |||||| || ||||| | || ||
Sbjct 6599 ACTCACTTGGGTGGTGAGGACTTTGACAACCGACTCGTTAATCACTTTGTCCAGGAGTTC 6658
Query 349922 AAG 349924
|||
Sbjct 6659 AAG 6661
>seq1846
Length=21677
Score = 123 bits (136), Expect = 8e-23
Identities = 245/357 (69%), Gaps = 8/357 (2%)
Strand=Plus/Minus
Query 378121 TCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTT-ATTG--TTTCTTACA 378177
|| || ||||| |||||||| |||| || |||| |||| | || || | ||
Sbjct 15651 TCCAAACCATCCTCTCCATACAAGAACTGGACAAC---ATCTCCCAGTGAGTTGCGAACT 15595
Query 378178 GTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAA 378237
|| ||| ||| ||||||| | || || | ||||| | ||| || |||||
Sbjct 15594 GTACCATCGTATTTAACCATGACCTCCTCCAGGGCTTTGACAAGCTTCCGCTGGATATAT 15535
Query 378238 CCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGG 378297
|| |||| | || || || ||||| ||||| | ||| |||||||| |||| ||||||
Sbjct 15534 CCCGTTTCAGCTGTCTTGACAGCAGTGTCAATCAGACCCTCACGACCAGCCATAGCATGG 15475
Query 378298 AAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCG 378357
||||| || || || || ||||| |||| | | | ||| | || | || || | |
Sbjct 15474 AAGAAAAACTCTGTGGGCGTAAGGCCACGGAGATACGAATTTTCGACGAAACCACGAGAC 15415
Query 378358 CCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGAT-TCTCAAACCCATATGG 378416
| || |||| ||||| |||||| |||| || || ||||||| | | ||||| | ||||
Sbjct 15414 TCGGGAGAATAATCATCCTTTGTAAAATGCGGCAAAGTACGATATTTGAAACCGA-ATGG 15356
Query 378417 AATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGCAATATT 378473
||| ||||| || |||||| || || |||| ||| | |||||||| |||||
Sbjct 15355 AATACGTTTGCCTTCAACAGATTGCTGGCCAACAACAGCAGTCATTTGAGAGATATT 15299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515179305886004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |