Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq295 145 8e-30 seq426 107 2e-18 >seq295 Length=8791 Score = 145 bits (160), Expect = 8e-30 Identities = 384/584 (66%), Gaps = 2/584 (0%) Strand=Plus/Minus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||||||||| | || ||| || || | ||||| | || ||| || | Sbjct 1906 TCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTCCACTCGCCA 1847 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | ||||||||| || |||||| || || || |||| || || ||||| || ||| Sbjct 1846 TTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAGAGATCTCGG 1787 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 || | || || | || |||||| ||| || || | ||| || | ||| |||| | Sbjct 1786 GCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAAGATATCGGTG 1727 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||||||||| ||||| || ||||| | || |||||| || ||||| | ||| Sbjct 1726 TGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCCCTGATCGACA 1667 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 || | || || ||||||||||| ||||||||||| || || || | | | || ||| Sbjct 1666 TATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGAGGAACCATTC 1607 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCC 79664 || || || | || | | |||||| | | | || || || || || || Sbjct 1606 GTTCCCGCAATGTAAGAGCCAGTACCACGAATG-CGGTGAATGTTGAGACCAATACCACC 1548 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 | ||| || || || || || | ||| ||||| || |||||||| ||| Sbjct 1547 AGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTCGATACTGTC 1488 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||||||||| ||| || ||||| | |||||| || | | ||||| || ||||| Sbjct 1487 TTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACCAGCATTGAA 1428 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 ||| || || | ||||| ||||| || || ||| ||| |||| || ||||| |||| Sbjct 1427 GAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGTCTCGATGAC 1368 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 | | || || || || || || || || || ||||||| Sbjct 1367 TTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGA 1324 Score = 113 bits (124), Expect = 5e-20 Identities = 391/606 (65%), Gaps = 8/606 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| || || || || || ||||| || || | | |||| |||||| || Sbjct 1324 TCATGCGTGTTGCTGTTGGAATTCATGGGGATGATGTAGAGAAAGTCATCGAGACCTATA 1383 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 | || ||| |||||| || ||||| ||||| | || || || ||||| || ||||| Sbjct 1384 ATCTCATGTCCCAGAAATTTTTCACTCACGCTTCTCCCACACTCTTCAATGCTGGTACCC 1443 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | | || |||||| | || || || | | ||||||||| ||||| || ||||| | Sbjct 1444 CCCAACCTCAGATGGCTTCTTGCTTTCTCATCGATATGAAGGAAGACAGTATCGAGGGTA 1503 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 | ||||| ||| | || || || || || ||| | || ||||| || || Sbjct 1504 TTTACGACACGTTGAAAACTTGTGCTTTGATTTCAAAGACTGCTGGTGGTATTGGTCTCA 1563 Query 19356 AC--TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA 19413 || | || || ||| | ||| | || || ||||| || | | Sbjct 1564 ACATTCACCGCATTCGTGGT--ACTGGCTCTTACATTGCGGGAACGAATGGTTCCTCAAA 1621 Query 19414 CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGG 19473 || || || || ||||||||||| |||||||| || || || || ||| | ||||| || Sbjct 1622 TGGAATTGTTCCCATGCTCCGCGTTTTCAACAATACCGCTAGATATGTCGATCAGGGAGG 1681 Query 19474 CGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531 ||| || || | ||| ||||| || || |||||||| |||||| | || || | Sbjct 1682 TAACAAGCGGCCAGGAGCT--TTCGCTATTTATCTCGAGCCGTGGCACACCGATATCTTT 1739 Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591 || || | || || || |||||| ||| | || || | ||| || || ||||| Sbjct 1740 GAGTTTTTGGACCTCCGTAAGAACCATGGTAAGGAAGAAGTTCGCGCCCGAGATCTCTTT 1799 Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651 || | |||| || || || |||||| || ||||||||| | | || ||| Sbjct 1800 CTTGCTCTCTGGACGCCCGATCTGTTCATGAAGCGTGTTGAGAAGAATGGCGAGTGGACT 1859 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAG 19711 || | ||||| | ||| || ||| | | || ||||| ||||| | ||| ||| | Sbjct 1860 CTCTTTTGCCCCAATGAAGCGCCAGGCTTGGCAGATGTCTATGGCGAAGAGTTTGATGCG 1919 Query 19712 TTGTAC 19717 | ||| Sbjct 1920 CTTTAC 1925 >seq426 Length=8128 Score = 107 bits (118), Expect = 2e-18 Identities = 330/497 (66%), Gaps = 15/497 (3%) Strand=Plus/Plus Query 59931 AAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTGGAGCATCA---TTTGCACAACGTCT 59986 || || || |||||||| | |||||| ||| | || ||| |||||||| || || Sbjct 4817 AAGGCTGATTGGGCCATCCGGTGGATTGAGGA-TAAAGAATCTAGCTTTGCACAGCGCCT 4875 Query 59987 CATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTG 60046 | | || || || || ||||| ||||||||| ||| || || | |||| ||||| Sbjct 4876 CGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCTATCTTCTG 4935 Query 60047 GCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGA 60106 |||||| || || ||||||||||| || || | || || |||||||| || || || || Sbjct 4936 GCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAGCTTATCTCTCGTGA 4995 Query 60107 CGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCC 60165 ||||||| | || || || || || | |||| || ||||| | | || Sbjct 4996 CGAGGGCTTGCACACTGATTTCGC-CTGTCTTCTCTTCTCCCACCT-CCGCCACCGCCCC 5053 Query 60166 CTTCCA-AGGATATTCACAAGATTGTTCAGTGGGCTTGTGAAG-TGGAGAGCGAGTTCAT 60223 ||| ||| | || | | || | ||| || | || | | | ||| |||||| | Sbjct 5054 ACCCCAGAGGCTGTTGAGAGGA-TCATCACTGAGGCCGTCACGATAGAGCAGGAGTTCCT 5112 Query 60224 CACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACAT 60283 | |||| ||||| ||| | || | || ||| |||| ||| || ||||| Sbjct 5113 CTCAGATGCGCTCCCAGTCGCGCTTCTCGGAATGAACGCCAAGCTCATGTGTCAATACAT 5172 Query 60284 TCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGG--AGAAGGACCAATTTACGGCGTG 60341 |||||||||| ||||||||| | | || || | ||| | | | ||| | Sbjct 5173 CGAGTTTGTCGCTGACCGCCTCCTCGTTGCATTGGGCAACAAGAA--AGTCTACAACTCC 5230 Query 60342 AATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAG 60401 | ||||| || |||| ||||| | ||||||| | | || |||||||||||||||||| Sbjct 5231 ACGAACCCATTTGACTTCATGGACAACATCTCGCTAGCTGGCAAGACCAACTTCTTTGAG 5290 Query 60402 AAGCGGGTCGGGGATTA 60418 ||||| || || || || Sbjct 5291 AAGCGTGTTGGCGACTA 5307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548498278825920