Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq295 145 8e-30
seq426 107 2e-18
>seq295
Length=8791
Score = 145 bits (160), Expect = 8e-30
Identities = 384/584 (66%), Gaps = 2/584 (0%)
Strand=Plus/Minus
Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365
|| ||||||||||| | || ||| || || | ||||| | || ||| || |
Sbjct 1906 TCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTCCACTCGCCA 1847
Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425
| ||||||||| || |||||| || || || |||| || || ||||| || |||
Sbjct 1846 TTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAGAGATCTCGG 1787
Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485
|| | || || | || |||||| ||| || || | ||| || | ||| |||| |
Sbjct 1786 GCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAAGATATCGGTG 1727
Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545
||||||||||| ||||| || ||||| | || |||||| || ||||| | |||
Sbjct 1726 TGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCCCTGATCGACA 1667
Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605
|| | || || ||||||||||| ||||||||||| || || || | | | || |||
Sbjct 1666 TATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGAGGAACCATTC 1607
Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCC 79664
|| || || | || | | |||||| | | | || || || || || ||
Sbjct 1606 GTTCCCGCAATGTAAGAGCCAGTACCACGAATG-CGGTGAATGTTGAGACCAATACCACC 1548
Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724
| ||| || || || || || | ||| ||||| || |||||||| |||
Sbjct 1547 AGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTCGATACTGTC 1488
Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784
||||||||| ||| || ||||| | |||||| || | | ||||| || |||||
Sbjct 1487 TTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACCAGCATTGAA 1428
Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844
||| || || | ||||| ||||| || || ||| ||| |||| || ||||| ||||
Sbjct 1427 GAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGTCTCGATGAC 1368
Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888
| | || || || || || || || || || |||||||
Sbjct 1367 TTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGA 1324
Score = 113 bits (124), Expect = 5e-20
Identities = 391/606 (65%), Gaps = 8/606 (1%)
Strand=Plus/Plus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175
||||||| || || || || || ||||| || || | | |||| |||||| ||
Sbjct 1324 TCATGCGTGTTGCTGTTGGAATTCATGGGGATGATGTAGAGAAAGTCATCGAGACCTATA 1383
Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235
| || ||| |||||| || ||||| ||||| | || || || ||||| || |||||
Sbjct 1384 ATCTCATGTCCCAGAAATTTTTCACTCACGCTTCTCCCACACTCTTCAATGCTGGTACCC 1443
Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295
| | || |||||| | || || || | | ||||||||| ||||| || ||||| |
Sbjct 1444 CCCAACCTCAGATGGCTTCTTGCTTTCTCATCGATATGAAGGAAGACAGTATCGAGGGTA 1503
Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355
| ||||| ||| | || || || || || ||| | || ||||| || ||
Sbjct 1504 TTTACGACACGTTGAAAACTTGTGCTTTGATTTCAAAGACTGCTGGTGGTATTGGTCTCA 1563
Query 19356 AC--TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA 19413
|| | || || ||| | ||| | || || ||||| || | |
Sbjct 1564 ACATTCACCGCATTCGTGGT--ACTGGCTCTTACATTGCGGGAACGAATGGTTCCTCAAA 1621
Query 19414 CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGG 19473
|| || || || ||||||||||| |||||||| || || || || ||| | ||||| ||
Sbjct 1622 TGGAATTGTTCCCATGCTCCGCGTTTTCAACAATACCGCTAGATATGTCGATCAGGGAGG 1681
Query 19474 CGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531
||| || || | ||| ||||| || || |||||||| |||||| | || || |
Sbjct 1682 TAACAAGCGGCCAGGAGCT--TTCGCTATTTATCTCGAGCCGTGGCACACCGATATCTTT 1739
Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591
|| || | || || || |||||| ||| | || || | ||| || || |||||
Sbjct 1740 GAGTTTTTGGACCTCCGTAAGAACCATGGTAAGGAAGAAGTTCGCGCCCGAGATCTCTTT 1799
Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651
|| | |||| || || || |||||| || ||||||||| | | || |||
Sbjct 1800 CTTGCTCTCTGGACGCCCGATCTGTTCATGAAGCGTGTTGAGAAGAATGGCGAGTGGACT 1859
Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAG 19711
|| | ||||| | ||| || ||| | | || ||||| ||||| | ||| ||| |
Sbjct 1860 CTCTTTTGCCCCAATGAAGCGCCAGGCTTGGCAGATGTCTATGGCGAAGAGTTTGATGCG 1919
Query 19712 TTGTAC 19717
| |||
Sbjct 1920 CTTTAC 1925
>seq426
Length=8128
Score = 107 bits (118), Expect = 2e-18
Identities = 330/497 (66%), Gaps = 15/497 (3%)
Strand=Plus/Plus
Query 59931 AAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTGGAGCATCA---TTTGCACAACGTCT 59986
|| || || |||||||| | |||||| ||| | || ||| |||||||| || ||
Sbjct 4817 AAGGCTGATTGGGCCATCCGGTGGATTGAGGA-TAAAGAATCTAGCTTTGCACAGCGCCT 4875
Query 59987 CATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTG 60046
| | || || || || ||||| ||||||||| ||| || || | |||| |||||
Sbjct 4876 CGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCTATCTTCTG 4935
Query 60047 GCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGA 60106
|||||| || || ||||||||||| || || | || || |||||||| || || || ||
Sbjct 4936 GCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAGCTTATCTCTCGTGA 4995
Query 60107 CGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCC 60165
||||||| | || || || || || | |||| || ||||| | | ||
Sbjct 4996 CGAGGGCTTGCACACTGATTTCGC-CTGTCTTCTCTTCTCCCACCT-CCGCCACCGCCCC 5053
Query 60166 CTTCCA-AGGATATTCACAAGATTGTTCAGTGGGCTTGTGAAG-TGGAGAGCGAGTTCAT 60223
||| ||| | || | | || | ||| || | || | | | ||| |||||| |
Sbjct 5054 ACCCCAGAGGCTGTTGAGAGGA-TCATCACTGAGGCCGTCACGATAGAGCAGGAGTTCCT 5112
Query 60224 CACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACAT 60283
| |||| ||||| ||| | || | || ||| |||| ||| || |||||
Sbjct 5113 CTCAGATGCGCTCCCAGTCGCGCTTCTCGGAATGAACGCCAAGCTCATGTGTCAATACAT 5172
Query 60284 TCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGG--AGAAGGACCAATTTACGGCGTG 60341
|||||||||| ||||||||| | | || || | ||| | | | ||| |
Sbjct 5173 CGAGTTTGTCGCTGACCGCCTCCTCGTTGCATTGGGCAACAAGAA--AGTCTACAACTCC 5230
Query 60342 AATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAG 60401
| ||||| || |||| ||||| | ||||||| | | || ||||||||||||||||||
Sbjct 5231 ACGAACCCATTTGACTTCATGGACAACATCTCGCTAGCTGGCAAGACCAACTTCTTTGAG 5290
Query 60402 AAGCGGGTCGGGGATTA 60418
||||| || || || ||
Sbjct 5291 AAGCGTGTTGGCGACTA 5307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548498278825920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |