Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq295 147 2e-30 seq408 105 7e-18 seq426 93.3 5e-14 >seq295 Length=8791 Score = 147 bits (162), Expect = 2e-30 Identities = 343/512 (67%), Gaps = 4/512 (1%) Strand=Plus/Plus Query 53273 TTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGC 53332 || || ||||| | || || || ||||| |||||||| || ||||||||| | Sbjct 1404 TTCACTCACGCTTCTCCCACACTCTTCAATGCTGGTACCCCCCAACCTCAGATGGCTTCT 1463 Query 53333 TGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAG 53392 ||||| || | | |||||||| ||| ||||| || || ||||| ||| | || Sbjct 1464 TGCTTTCTCATCGATATGAAGGAAGACAGTATCGAGGGTATTTACGACACGTTGAAAACT 1523 Query 53393 TGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGC 53451 ||||| || || ||| | |||||||| ||| || || | | | | | |||| Sbjct 1524 TGTGCTTTGATTTCAAAGACTGCTGGTGGTATTGGTCTCAACATTCACCG-CATTCGTGG 1582 Query 53452 GAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCG 53511 | ||| | || ||| ||||| || | | ||||||| || || |||||||| Sbjct 1583 TACTGGCTCTTACATTGCGGGAACGAATGGTTCCTCAAATGGAATTGTTCCCATGCTCCG 1642 Query 53512 CGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGC-GCAAGGGGTCGT 53570 ||| |||||||| || || | || ||| | ||||| ||| |||| || ||| | | | Sbjct 1643 CGTTTTCAACAATACCGCTAGATATGTCGATCAGGGAGGTAACAAGCGGCCAGGAG-CTT 1701 Query 53571 TCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGA 53630 |||| || || ||||||||||||||| |||| || | |||||| | || || ||| || Sbjct 1702 TCGCTATTTATCTCGAGCCGTGGCACACCGATATCTTTGAGTTTTTGGACCTCCGTAAGA 1761 Query 53631 ATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACC 53690 | || ||| | ||||| | ||| ||| || || ||| ||||| |||| || || | Sbjct 1762 ACCATGGTAAGGAAGAAGTTCGCGCCCGAGATCTCTTTCTTGCTCTCTGGACGCCCGATC 1821 Query 53691 TCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCC 53750 | |||||| | || |||||| | | |||||| || | ||||| || || | Sbjct 1822 TGTTCATGAAGCGTGTTGAGAAGAATGGCGAGTGGACTCTCTTTTGCCCCAATGAAGCGC 1881 Query 53751 CCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 | ||| | | |||||| || || |||||| Sbjct 1882 CAGGCTTGGCAGATGTCTATGGCGAAGAGTTT 1913 >seq408 Length=8224 Score = 105 bits (116), Expect = 7e-18 Identities = 213/310 (69%), Gaps = 6/310 (2%) Strand=Plus/Minus Query 152758 ACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTC 152817 || ||||| | ||||| | | || ||||| || ||| ||| ||||| || ||| Sbjct 2782 ACTTGGAAAAAGTTGATCAATAGACCTTTGATATGGCTTCCATCATGATCCTGATCAGTC 2723 Query 152818 ATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGACCTTTCCATGT--T 152875 |||||||| ||| | |||||||| ||| | | | ||| | ||| | || | ||| | Sbjct 2722 ATGATCATGAGATGTCCGTAGCGGAGGCC-CTTGGTGTCG-GTATATTCTTTCTTGTGCT 2665 Query 152876 GAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCG 152935 | |||||||||| ||||||| ||| | ||| |||| | || | ||| | || | Sbjct 2664 GGAGCCCGAGGAAATTTTTGATGTTCTGGATTTCTGCATTTTTGGATATCTGATCAACAG 2605 Query 152936 TGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC 152995 |||||||||||||||| || | ||||| || || || || || ||||| | | | Sbjct 2604 AGGCATCCCGAACATTGAGCAGTTTTCCGCGTAGAGGGAATACACCGAAAAGATCAGGTC 2545 Query 152996 CTACAA-CGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATA 153054 | |||| |||| ||||||| ||||| || | || || || || || || || | ||| Sbjct 2544 CAACAATAGCTC-GACCGGCCATAGCCAGACCCTTTGCAGAATCTCCTTCAGTCAGAATG 2486 Query 153055 AGCGTACAGT 153064 || || |||| Sbjct 2485 AGAGTGCAGT 2476 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/191 (71%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 153769 TTGCTCATGTTGTCGGTCCAAGTTTGCATGTAGATCTTCTT--ACCGTCACTAA----TT 153822 ||| |||| ||||||||||| ||||| |||| ||||||| || | | | || Sbjct 1708 TTGGTCATATTGTCGGTCCATGTTTGTTTGTATTTCTTCTTTAACTTTGAGTCTGCGGTT 1649 Query 153823 TTGATATTAAATTTTGAACTGAAAACGTTAGCCAACTTGGCACCGTAACCATTGCGACCG 153882 | || | |||||| | ||||| | |||| | ||||||||| || || || ||||| Sbjct 1648 TCGAGAGTAAATTCGGTGCTGAAGATGTTACAGAGCTTGGCACCATAGCCGTTACGACCA 1589 Query 153883 CCCGTCACGCGTTGTTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATG 153942 || ||||| ||||| | ||| ||||||||||| ||| | ||||| || || || Sbjct 1588 CCAGTCACCTTTTGTTGGTTGTCATTGTAGTTGGAAGAGGTAAGGAGGTGGCCGAAAATC 1529 Query 153943 AGTTCAGGGAT 153953 |||||||| || Sbjct 1528 AGTTCAGGTAT 1518 >seq426 Length=8128 Score = 93.3 bits (102), Expect = 5e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || ||||| | ||| |||||||| || || || ||||| | ||| ||||| | | Sbjct 4980 TCGTTAGAAAATGTAAGCCCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCA 4921 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 || || |||||||||||||||||||| ||| ||| |||||||| ||||| || || || Sbjct 4920 AAAGATCCACTGAAGAAGATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAA 4862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547189542106400