Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq295 147 2e-30
seq408 105 7e-18
seq426 93.3 5e-14
>seq295
Length=8791
Score = 147 bits (162), Expect = 2e-30
Identities = 343/512 (67%), Gaps = 4/512 (1%)
Strand=Plus/Plus
Query 53273 TTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGC 53332
|| || ||||| | || || || ||||| |||||||| || ||||||||| |
Sbjct 1404 TTCACTCACGCTTCTCCCACACTCTTCAATGCTGGTACCCCCCAACCTCAGATGGCTTCT 1463
Query 53333 TGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAG 53392
||||| || | | |||||||| ||| ||||| || || ||||| ||| | ||
Sbjct 1464 TGCTTTCTCATCGATATGAAGGAAGACAGTATCGAGGGTATTTACGACACGTTGAAAACT 1523
Query 53393 TGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGC 53451
||||| || || ||| | |||||||| ||| || || | | | | | ||||
Sbjct 1524 TGTGCTTTGATTTCAAAGACTGCTGGTGGTATTGGTCTCAACATTCACCG-CATTCGTGG 1582
Query 53452 GAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCG 53511
| ||| | || ||| ||||| || | | ||||||| || || ||||||||
Sbjct 1583 TACTGGCTCTTACATTGCGGGAACGAATGGTTCCTCAAATGGAATTGTTCCCATGCTCCG 1642
Query 53512 CGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGC-GCAAGGGGTCGT 53570
||| |||||||| || || | || ||| | ||||| ||| |||| || ||| | | |
Sbjct 1643 CGTTTTCAACAATACCGCTAGATATGTCGATCAGGGAGGTAACAAGCGGCCAGGAG-CTT 1701
Query 53571 TCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGA 53630
|||| || || ||||||||||||||| |||| || | |||||| | || || ||| ||
Sbjct 1702 TCGCTATTTATCTCGAGCCGTGGCACACCGATATCTTTGAGTTTTTGGACCTCCGTAAGA 1761
Query 53631 ATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACC 53690
| || ||| | ||||| | ||| ||| || || ||| ||||| |||| || || |
Sbjct 1762 ACCATGGTAAGGAAGAAGTTCGCGCCCGAGATCTCTTTCTTGCTCTCTGGACGCCCGATC 1821
Query 53691 TCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCC 53750
| |||||| | || |||||| | | |||||| || | ||||| || || |
Sbjct 1822 TGTTCATGAAGCGTGTTGAGAAGAATGGCGAGTGGACTCTCTTTTGCCCCAATGAAGCGC 1881
Query 53751 CCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782
| ||| | | |||||| || || ||||||
Sbjct 1882 CAGGCTTGGCAGATGTCTATGGCGAAGAGTTT 1913
>seq408
Length=8224
Score = 105 bits (116), Expect = 7e-18
Identities = 213/310 (69%), Gaps = 6/310 (2%)
Strand=Plus/Minus
Query 152758 ACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTC 152817
|| ||||| | ||||| | | || ||||| || ||| ||| ||||| || |||
Sbjct 2782 ACTTGGAAAAAGTTGATCAATAGACCTTTGATATGGCTTCCATCATGATCCTGATCAGTC 2723
Query 152818 ATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGACCTTTCCATGT--T 152875
|||||||| ||| | |||||||| ||| | | | ||| | ||| | || | ||| |
Sbjct 2722 ATGATCATGAGATGTCCGTAGCGGAGGCC-CTTGGTGTCG-GTATATTCTTTCTTGTGCT 2665
Query 152876 GAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCG 152935
| |||||||||| ||||||| ||| | ||| |||| | || | ||| | || |
Sbjct 2664 GGAGCCCGAGGAAATTTTTGATGTTCTGGATTTCTGCATTTTTGGATATCTGATCAACAG 2605
Query 152936 TGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC 152995
|||||||||||||||| || | ||||| || || || || || ||||| | | |
Sbjct 2604 AGGCATCCCGAACATTGAGCAGTTTTCCGCGTAGAGGGAATACACCGAAAAGATCAGGTC 2545
Query 152996 CTACAA-CGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATA 153054
| |||| |||| ||||||| ||||| || | || || || || || || || | |||
Sbjct 2544 CAACAATAGCTC-GACCGGCCATAGCCAGACCCTTTGCAGAATCTCCTTCAGTCAGAATG 2486
Query 153055 AGCGTACAGT 153064
|| || ||||
Sbjct 2485 AGAGTGCAGT 2476
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/191 (71%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 153769 TTGCTCATGTTGTCGGTCCAAGTTTGCATGTAGATCTTCTT--ACCGTCACTAA----TT 153822
||| |||| ||||||||||| ||||| |||| ||||||| || | | | ||
Sbjct 1708 TTGGTCATATTGTCGGTCCATGTTTGTTTGTATTTCTTCTTTAACTTTGAGTCTGCGGTT 1649
Query 153823 TTGATATTAAATTTTGAACTGAAAACGTTAGCCAACTTGGCACCGTAACCATTGCGACCG 153882
| || | |||||| | ||||| | |||| | ||||||||| || || || |||||
Sbjct 1648 TCGAGAGTAAATTCGGTGCTGAAGATGTTACAGAGCTTGGCACCATAGCCGTTACGACCA 1589
Query 153883 CCCGTCACGCGTTGTTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATG 153942
|| ||||| ||||| | ||| ||||||||||| ||| | ||||| || || ||
Sbjct 1588 CCAGTCACCTTTTGTTGGTTGTCATTGTAGTTGGAAGAGGTAAGGAGGTGGCCGAAAATC 1529
Query 153943 AGTTCAGGGAT 153953
|||||||| ||
Sbjct 1528 AGTTCAGGTAT 1518
>seq426
Length=8128
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849
|| || ||||| | ||| |||||||| || || || ||||| | ||| ||||| | |
Sbjct 4980 TCGTTAGAAAATGTAAGCCCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCA 4921
Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908
|| || |||||||||||||||||||| ||| ||| |||||||| ||||| || || ||
Sbjct 4920 AAAGATCCACTGAAGAAGATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAA 4862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547189542106400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |