Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1161 159 4e-34 seq849 116 4e-21 seq426 113 5e-20 seq602 107 2e-18 >seq1161 Length=5408 Score = 159 bits (176), Expect = 4e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 ||||| || || || |||||||| ||||| | ||||| || || ||||| ||||| Sbjct 4377 GTCAAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTGATACCATTGAC 4318 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| |||||| |||||||||||||| || || ||||| ||||| ||||| || Sbjct 4317 AATGTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGCAACGTCTGATC 4258 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 ||||| || ||||| || || |||| || ||| | | || |||||| | || |||||| Sbjct 4257 TTTGCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATATTCAGAAGGAA 4198 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || ||||| ||||| ||| | ||||| || |||||| Sbjct 4197 TCGACTCTCCATCTTGTCCTTCGTCTCCGTGGTGGA 4162 Score = 156 bits (172), Expect = 5e-33 Identities = 176/231 (76%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || |||||||| ||||| || || || || ||| || Sbjct 4162 AATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAG--AGC 4105 Query 27465 T--GATAGCATTGCAAAT-TTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 | |||| ||||| || || || || ||||| || ||||| ||||| || || ||||| Sbjct 4104 TCAGATACCATTGATAACGTTAAAAGC-AAAATCCAAGACAAAGAGGGTATCCCACCAGA 4046 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 |||||| || || || || || || || ||||| ||||||| || || || | || || Sbjct 4045 CCAGCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTA 3986 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||||| || || || ||| | |||||||| ||||| Sbjct 3985 TAATATCCAAAAGGAATCCACACTCCACCTTGTCCTCCGTCTTCGGGGTGG 3935 Score = 154 bits (170), Expect = 2e-32 Identities = 175/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || |||||||| || || || || || |||||| || | Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAG--AGCT 3876 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| || | ||| |||||||||||| ||||| || ||||| ||||||| Sbjct 3875 CCGATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACC 3816 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||||| || || |||||||||||||| || || |||| ||| || || | ||||| | Sbjct 3815 AGCAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACA 3756 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | |||||||||| |||||| ||| |||| ||| | | || ||||| ||| Sbjct 3755 ACATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTTGCGGGGTGGCCAA 3703 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || ||||| ||||||||||||||||||| || | | ||| || Sbjct 4673 ACCGGCAAGACCATCACTCTCGAGGTTGAGTCAGGTGATACTATCGACGCGGTTAAGTCT 4614 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||| |||||||| || || ||||| |||||||| ||||| ||||| ||||| ||| Sbjct 4613 AAGATTCAAGACAAGGAAGGCATCCCTCCCGACCAGCAACGTCTTATTTTCGCTGGAAAG 4554 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || || || | ||||| || | || || ||| | || ||||| || |||||||| Sbjct 4553 CAGCTGGAAGACGGCCGTACTCTTTCTGATTACAATATTCAGAAGGAGTCTACTCTTCAC 4494 Query 27610 CTAGTCTTGCGTCTTCGCGGTGGA 27633 | || | ||||| || || ||| Sbjct 4493 TTGGTTCTCCGTCTCCGTGGAGGA 4470 >seq849 Length=6452 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || ||||||||||| ||||| | || | ||| Sbjct 1823 CTTCGTCAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGACACCAT 1764 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| ||||| ||||||||||||||||| || || |||||||| || | Sbjct 1763 CGACAATGTCAAGAGCAAAATCCAGGACAAGGAGGGAATCCCACCCGACCAGCAACGGTT 1704 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGA 27560 || ||||| || ||||| || ||||| Sbjct 1703 GATCTTTGCCGGCAAGCAGCTTGAGGA 1677 >seq426 Length=8128 Score = 113 bits (124), Expect = 5e-20 Identities = 138/188 (73%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || |||||||| ||||||||||||||||| | || | || |||| ||||| Sbjct 4814 AAGAAGGCTGATTGGGCCATCCGGTGGATTGAGGATAAAGAATCTAGCTTTGCACAGCGC 4873 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 |||| || || || ||| ||||| || ||||| ||| || || |||||| ||| Sbjct 4874 CTCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCTATCTTC 4933 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || || || ||||| ||||| || || | ||||| |||||||| |||||||| Sbjct 4934 TGGCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAGCTTATCTCTCGT 4993 Query 64840 GACGAGGG 64847 |||||||| Sbjct 4994 GACGAGGG 5001 >seq602 Length=25977 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||||||||| || || |||||||| || || || || || || ||||| |||||| Sbjct 8055 GACAAGGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAG 7996 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| || || ||||| || ||| | Sbjct 7995 GATGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTA 7936 Query 27619 CGTCTTCGCGGTGG 27632 ||||| |||||||| Sbjct 7935 CGTCTGCGCGGTGG 7922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570282825492160