Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 159 4e-34
seq849 116 4e-21
seq426 113 5e-20
seq602 107 2e-18
>seq1161
Length=5408
Score = 159 bits (176), Expect = 4e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
||||| || || || |||||||| ||||| | ||||| || || ||||| |||||
Sbjct 4377 GTCAAAACTCTAACTGGCAAGACCATTACATTGGAGGTGGAATCTTCTGATACCATTGAC 4318
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||| |||||| |||||||||||||| || || ||||| ||||| ||||| ||
Sbjct 4317 AATGTAAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCAGATCAGCAACGTCTGATC 4258
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
||||| || ||||| || || |||| || ||| | | || |||||| | || ||||||
Sbjct 4257 TTTGCGGGAAAGCAGCTGGAAGATGGCCGCACCTTGTCTGATTATAATATTCAGAAGGAA 4198
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| ||||| ||||| ||| | ||||| || ||||||
Sbjct 4197 TCGACTCTCCATCTTGTCCTTCGTCTCCGTGGTGGA 4162
Score = 156 bits (172), Expect = 5e-33
Identities = 176/231 (76%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || |||||||| ||||| || || || || ||| ||
Sbjct 4162 AATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAG--AGC 4105
Query 27465 T--GATAGCATTGCAAAT-TTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
| |||| ||||| || || || || ||||| || ||||| ||||| || || |||||
Sbjct 4104 TCAGATACCATTGATAACGTTAAAAGC-AAAATCCAAGACAAAGAGGGTATCCCACCAGA 4046
Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
|||||| || || || || || || || ||||| ||||||| || || || | || ||
Sbjct 4045 CCAGCAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTA 3986
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||||||||||| || || || ||| | |||||||| |||||
Sbjct 3985 TAATATCCAAAAGGAATCCACACTCCACCTTGTCCTCCGTCTTCGGGGTGG 3935
Score = 154 bits (170), Expect = 2e-32
Identities = 175/233 (75%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || || |||||||| || || || || || |||||| || |
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAG--AGCT 3876
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| |||| || | ||| |||||||||||| ||||| || ||||| |||||||
Sbjct 3875 CCGATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACC 3816
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||||| || || |||||||||||||| || || |||| ||| || || | ||||| |
Sbjct 3815 AGCAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACA 3756
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
| |||||||||| |||||| ||| |||| ||| | | || ||||| |||
Sbjct 3755 ACATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTTGCGGGGTGGCCAA 3703
Score = 143 bits (158), Expect = 3e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || ||||| ||||||||||||||||||| || | | ||| ||
Sbjct 4673 ACCGGCAAGACCATCACTCTCGAGGTTGAGTCAGGTGATACTATCGACGCGGTTAAGTCT 4614
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||| |||||||| || || ||||| |||||||| ||||| ||||| ||||| |||
Sbjct 4613 AAGATTCAAGACAAGGAAGGCATCCCTCCCGACCAGCAACGTCTTATTTTCGCTGGAAAG 4554
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || || || | ||||| || | || || ||| | || ||||| || ||||||||
Sbjct 4553 CAGCTGGAAGACGGCCGTACTCTTTCTGATTACAATATTCAGAAGGAGTCTACTCTTCAC 4494
Query 27610 CTAGTCTTGCGTCTTCGCGGTGGA 27633
| || | ||||| || || |||
Sbjct 4493 TTGGTTCTCCGTCTCCGTGGAGGA 4470
>seq849
Length=6452
Score = 116 bits (128), Expect = 4e-21
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || ||||||||||| ||||| | || | |||
Sbjct 1823 CTTCGTCAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGACACCAT 1764
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| ||||| ||||||||||||||||| || || |||||||| || |
Sbjct 1763 CGACAATGTCAAGAGCAAAATCCAGGACAAGGAGGGAATCCCACCCGACCAGCAACGGTT 1704
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGA 27560
|| ||||| || ||||| || |||||
Sbjct 1703 GATCTTTGCCGGCAAGCAGCTTGAGGA 1677
>seq426
Length=8128
Score = 113 bits (124), Expect = 5e-20
Identities = 138/188 (73%), Gaps = 3/188 (2%)
Strand=Plus/Plus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719
|| |||||||| ||||||||||||||||| | || | || |||| |||||
Sbjct 4814 AAGAAGGCTGATTGGGCCATCCGGTGGATTGAGGATAAAGAATCTAGCTTTGCACAGCGC 4873
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|||| || || || ||| ||||| || ||||| ||| || || |||||| |||
Sbjct 4874 CTCGTCGCCTTCGCGGCTGTTGAAGGCATCTTCTTCAGTGGATCTTTTGCTTCTATCTTC 4933
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || || || ||||| ||||| || || | ||||| |||||||| ||||||||
Sbjct 4934 TGGCTCAAGAAACGAGGCCTCATGCCTGGGCTTACATTTTCTAACGAGCTTATCTCTCGT 4993
Query 64840 GACGAGGG 64847
||||||||
Sbjct 4994 GACGAGGG 5001
>seq602
Length=25977
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||||||||| || || |||||||| || || || || || || ||||| ||||||
Sbjct 8055 GACAAGGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAG 7996
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || || || | ||||| || |||| ||||| || || ||||| || ||| |
Sbjct 7995 GATGGCCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTA 7936
Query 27619 CGTCTTCGCGGTGG 27632
||||| ||||||||
Sbjct 7935 CGTCTGCGCGGTGG 7922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570282825492160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |