Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 138 7e-28
>seq1161
Length=5408
Score = 138 bits (152), Expect = 7e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | ||||| ||| |||||||| || |||||||| |||
Sbjct 3935 CCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAA 3994
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | || ||||||||||| ||||| || || | || || ||||| || ||
Sbjct 3995 AGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGG 4054
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||||| |||||| ||| ||| |||||||| || ||| || ||| |||||| ||
Sbjct 4055 ATACCCTCTTTGTCTTGGAT-TTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGAC 4113
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||| || ||||| ||||| | || || || || ||||||||
Sbjct 4114 TTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCAT 4161
Score = 136 bits (150), Expect = 2e-27
Identities = 160/214 (75%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|||||| ||||||||||||||||||||||| ||||| || || || ||||| || | ||
Sbjct 3721 CAACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATC 3780
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||| || || ||||| ||||| || | ||||| ||||| || || | || ||||| ||
Sbjct 3781 TTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATC 3840
Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
||| ||| | || ||| | ||| || || |||||| ||||| | || || |
Sbjct 3841 -CTGAATTTTACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGG 3899
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||||| | |||||||| |||||||||||
Sbjct 3900 TTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314714763253244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |