Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 118 9e-22
>seq1161
Length=5408
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| ||||||||||| | || || || ||||| || |||
Sbjct 3933 ATGCAGATTTTCGTGAAAACCCTGACCGGCAAAACCATCACACTCGAAGTTGAGAGCTCC 3874
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || |||||||| || || ||||| || || || || ||
Sbjct 3873 GATACTATTGACAACGTAAAGAGTAAAATTCAGGATAAGGAAGGGATTCCCCCAGACCAG 3814
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || || || || ||||||| || ||| | ||||| ||||||
Sbjct 3813 CAGCGCCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGGACACTCTCCGACTACAAC 3754
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| ||||||||| || | ||||| || ||| | ||||||||||||
Sbjct 3753 ATCCAAAAGGAGAGCACTCTCCATTTAGTGTTGAGGTTGCGGGGTGGC 3706
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||||||||| |||| || || ||||| || ||
Sbjct 4161 ATGCAGATCTTCGTTAAGACACTGACCGGCAAAACTATCACCCTGGAAGTCGAGAGCTCA 4102
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||||| ||||||||||| || || ||||| || ||
Sbjct 4101 GATACCATTGATAACGTTAAAAGCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 4042
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || | || | |||||| |||||| | || || | ||| |||| ||||| ||
Sbjct 4041 CAACGACTCATCTTCGCCGGAAAACAACTTGAGGATGGCCGGACACTTTCGGATTATAAT 3982
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | || | || | ||| | |||||||| ||
Sbjct 3981 ATCCAAAAGGAATCCACACTCCACCTTGTCCTCCGTCTTCGGGGTGGTAT 3932
Score = 93.3 bits (102), Expect = 4e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||||||||| |||||||| || ||||| || || ||| | || | ||| || ||
Sbjct 4613 AAGATTCAAGACAAGGAAGGCATCCCTCCCGACCAGCAACGTCTTATTTTCGCTGGAAAG 4554
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| |||||||| | || |||| |||||||| ||||| |||||||| || | ||
Sbjct 4553 CAGCTGGAAGACGGCCGTACTCTTTCTGATTACAATATTCAGAAGGAGTCTACTCTTCAC 4494
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| | ||| | || || || ||
Sbjct 4493 TTGGTTCTCCGTCTCCGTGGAGGAAT 4468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434897371695360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |