Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1161 161 2e-34 seq849 125 2e-23 seq602 114 3e-20 >seq1161 Length=5408 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||||||||| || ||||| || |||||||| |||||||||| ||| ||| Sbjct 3941 CGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTC 4000 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || || || || || |||||||| || ||||| ||||| || || | || Sbjct 4001 CGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCC 4060 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| ||||| || ||| ||||| || ||||| || ||||| || || || || Sbjct 4061 TCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGG 4120 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || || || ||||| || || | ||||||| Sbjct 4121 GTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||| ||| ||||||||||| || || | || |||| ||||||||||||||| Sbjct 3731 TGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCTTCCAGCTGC 3790 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| ||||| || ||||| || |||| |||||||| ||||| || || Sbjct 3791 TTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAATTTTA 3850 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || ||||| || || || || ||||| ||||| ||||| ||||| || || || || Sbjct 3851 CTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCCGGTC 3910 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 || || || || || | |||||| Sbjct 3911 AGGGTTTTCACGAAAATCTGCAT 3933 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || | ||||||||| ||||| || || || || ||||| | ||| Sbjct 4473 TCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAG 4532 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | || |||||||||||||| || ||||| ||||| ||||| ||||| ||||| | Sbjct 4533 AGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGAT 4592 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||||||||| || ||||| || || ||||| || ||| |||||||| Sbjct 4593 GCCTTCCTTGTCTTGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACCTC 4652 Query 211070 GAGAGTGATCGTCTTTCCCGTGA 211092 ||||||||| ||||| || |||| Sbjct 4653 GAGAGTGATGGTCTTGCCGGTGA 4675 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || ||||| || || || || || |||||||| | | ||| | |||||| Sbjct 4178 AGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCT 4237 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || ||||| || || || || | || ||||||||| Sbjct 4238 TCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCC 4297 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || || || ||||| ||||| ||| ||||| | || || ||| Sbjct 4298 TGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAATGGTC 4357 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || ||||| || || Sbjct 4358 TTGCCAGTTAGAGTTTTGAC 4377 >seq849 Length=6452 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || ||||||||||| ||| |||| || || || ||||||||||| || ||||| Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 1703 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | ||||| ||||| || || | ||| |||||||||||||| || || || || ||| Sbjct 1704 AACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGTCG 1763 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| | || ||||| |||||||| ||||| ||||| || ||||| || || Sbjct 1764 ATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 1822 >seq602 Length=25977 Score = 114 bits (126), Expect = 3e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || || | |||||| |||||||| || ||||| || |||||||| || || | ||| || Sbjct 7928 CGCAGACGTAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTG 7987 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || ||||||||||| |||||||| |||||||| ||||| || || | ||| Sbjct 7988 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCC 8047 Query 211014 TCCTTGTC 211021 |||||||| Sbjct 8048 TCCTTGTC 8055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159094553875820