Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 161 2e-34
seq849 125 2e-23
seq602 114 3e-20
>seq1161
Length=5408
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||||||||| || ||||| || |||||||| |||||||||| ||| |||
Sbjct 3941 CGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTC 4000
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || || || || || |||||||| || ||||| ||||| || || | ||
Sbjct 4001 CGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCC 4060
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| ||||| ||||| || ||| ||||| || ||||| || ||||| || || || ||
Sbjct 4061 TCTTTGTCTTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGG 4120
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || || || || ||||| || || | |||||||
Sbjct 4121 GTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| |||||| ||| ||||||||||| || || | || |||| |||||||||||||||
Sbjct 3731 TGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCTTCCAGCTGC 3790
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| ||||| || ||||| || |||| |||||||| ||||| || ||
Sbjct 3791 TTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAATTTTA 3850
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| || || || || ||||| ||||| ||||| ||||| || || || ||
Sbjct 3851 CTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCCGGTC 3910
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | ||||||
Sbjct 3911 AGGGTTTTCACGAAAATCTGCAT 3933
Score = 132 bits (146), Expect = 1e-25
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | || || | ||||||||| ||||| || || || || ||||| | |||
Sbjct 4473 TCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAG 4532
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | || |||||||||||||| || ||||| ||||| ||||| ||||| ||||| |
Sbjct 4533 AGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGAT 4592
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||||||||||| || ||||| || || ||||| || ||| ||||||||
Sbjct 4593 GCCTTCCTTGTCTTGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACCTC 4652
Query 211070 GAGAGTGATCGTCTTTCCCGTGA 211092
||||||||| ||||| || ||||
Sbjct 4653 GAGAGTGATGGTCTTGCCGGTGA 4675
Score = 127 bits (140), Expect = 5e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || ||||| || || || || || |||||||| | | ||| | ||||||
Sbjct 4178 AGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCT 4237
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || ||||| || ||||| || || || || | || |||||||||
Sbjct 4238 TCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCC 4297
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || || || || || ||||| ||||| ||| ||||| | || || |||
Sbjct 4298 TGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAATGGTC 4357
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || || ||||| || ||
Sbjct 4358 TTGCCAGTTAGAGTTTTGAC 4377
>seq849
Length=6452
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| || ||||||||||| ||| |||| || || || ||||||||||| || |||||
Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 1703
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| ||||| ||||| || || | ||| |||||||||||||| || || || || |||
Sbjct 1704 AACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATTTTGCTCTTGACATTGTCG 1763
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| | || ||||| |||||||| ||||| ||||| || ||||| || ||
Sbjct 1764 ATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 1822
>seq602
Length=25977
Score = 114 bits (126), Expect = 3e-20
Identities = 102/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| || | |||||| |||||||| || ||||| || |||||||| || || | ||| ||
Sbjct 7928 CGCAGACGTAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTG 7987
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || ||||||||||| |||||||| |||||||| ||||| || || | |||
Sbjct 7988 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCC 8047
Query 211014 TCCTTGTC 211021
||||||||
Sbjct 8048 TCCTTGTC 8055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159094553875820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |