Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1161 98.7 9e-16 >seq1161 Length=5408 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || ||||| ||||||||||| | |||||| || | || ||||| ||||| || || || Sbjct 3971 TCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAG 4030 Query 39154 ATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || || |||||||| |||||| | | ||||||||| |||||| ||| | | Sbjct 4031 ATGAGTCGTTGCTGGTCTGGTGGG-ATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTT 4089 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | ||||| ||| ||| || |||| |||||| |||| || ||||| || || Sbjct 4090 ATCAATGGTATCTGAGCT---CTCGACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTT 4146 Query 39270 AACAAAGATTTGCAT 39284 ||| ||||| ||||| Sbjct 4147 AACGAAGATCTGCAT 4161 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 ||||| ||||| || |||||||| ||||| || || || |||| ||||| || | || Sbjct 3722 AACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCT 3781 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || ||||| || || ||||| || || ||||||||||| | ||| | | || || ||| Sbjct 3782 TCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCC 3841 Query 39193 ATGATTTT-CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATAC 39250 ||||| || ||| ||| | | | |||||| ||| || || | ||||| Sbjct 3842 TGAATTTTACTCTTT--ACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGG 3899 Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || ||||| ||||| || || || ||||| Sbjct 3900 TTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429525350683484