Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 98.7 9e-16
>seq1161
Length=5408
Score = 98.7 bits (108), Expect = 9e-16
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
|| ||||| ||||||||||| | |||||| || | || ||||| ||||| || || ||
Sbjct 3971 TCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAG 4030
Query 39154 ATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| || || |||||||| |||||| | | ||||||||| |||||| ||| | |
Sbjct 4031 ATGAGTCGTTGCTGGTCTGGTGGG-ATACCCTCTTTGTCTTGGATTTTGCTTTTAACGTT 4089
Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269
| | ||||| ||| ||| || |||| |||||| |||| || ||||| || ||
Sbjct 4090 ATCAATGGTATCTGAGCT---CTCGACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTT 4146
Query 39270 AACAAAGATTTGCAT 39284
||| ||||| |||||
Sbjct 4147 AACGAAGATCTGCAT 4161
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132
||||| ||||| || |||||||| ||||| || || || |||| ||||| || | ||
Sbjct 3722 AACACTAAATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCT 3781
Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192
|| ||||| || || ||||| || || ||||||||||| | ||| | | || || |||
Sbjct 3782 TCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCC 3841
Query 39193 ATGATTTT-CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATAC 39250
||||| || ||| ||| | | | |||||| ||| || || | |||||
Sbjct 3842 TGAATTTTACTCTTT--ACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGG 3899
Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||| || ||||| ||||| || || || |||||
Sbjct 3900 TTTTGCCGGTCAGGGTTTTCACGAAAATCTGCAT 3933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429525350683484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |