Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1161 141 2e-28 seq849 89.7 1e-12 >seq1161 Length=5408 Score = 141 bits (156), Expect = 2e-28 Identities = 167/224 (75%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | |||||||||||||| |||||||| ||||||| ||| ||||| | | || Sbjct 3941 CGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTC 4000 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || || || || || |||||||| |||||||| ||||| || || ||||| Sbjct 4001 CGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCC 4060 Query 225613 TCCTTGTCTTGGATCTTTTGC--TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 || |||||||||| |||||| || || || ||||| |||||| | || || || | Sbjct 4061 TCTTTGTCTTGGA--TTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCA 4118 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || ||||| |||| || || | ||| | |||||| Sbjct 4119 GGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| ||||| || || || || | ||||||||| | | ||| | || ||| Sbjct 4486 AGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCT 4545 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| ||||| ||||| |||||||| || || |||||||||||| Sbjct 4546 TCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCT 4605 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || || ||||| || || | || || || | ||||| ||| Sbjct 4606 TGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACCTCGAGAGTGATGGTC 4665 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 4666 TTGCCGGT 4673 >seq849 Length=6452 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| || || ||||| | ||||| |||||||| || || || ||| Sbjct 1674 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAACCGTTGCTGGTCGGGTGGGATTCCCTCC 1733 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| ||||| || ||| ||| ||||||||||| || || || || | ||| Sbjct 1734 TTGTCCTGGATTTTGCTCTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTG 1793 Query 225676 ATCGTCTTGCCCGT 225689 || ||||||||||| Sbjct 1794 ATGGTCTTGCCCGT 1807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192472099644392