Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 141 2e-28
seq849 89.7 1e-12
>seq1161
Length=5408
Score = 141 bits (156), Expect = 2e-28
Identities = 167/224 (75%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | |||||||||||||| |||||||| ||||||| ||| ||||| | | ||
Sbjct 3941 CGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTC 4000
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || || || || || |||||||| |||||||| ||||| || || |||||
Sbjct 4001 CGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCC 4060
Query 225613 TCCTTGTCTTGGATCTTTTGC--TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
|| |||||||||| |||||| || || || ||||| |||||| | || || || |
Sbjct 4061 TCTTTGTCTTGGA--TTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCA 4118
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || ||||| |||| || || | ||| | ||||||
Sbjct 4119 GGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| ||||| || || || || | ||||||||| | | ||| | || |||
Sbjct 4486 AGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACGGCCGTCT 4545
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| |||||||| ||||| ||||| |||||||| || || ||||||||||||
Sbjct 4546 TCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCT 4605
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || || ||||| || || | || || || | ||||| |||
Sbjct 4606 TGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACCTCGAGAGTGATGGTC 4665
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 4666 TTGCCGGT 4673
>seq849
Length=6452
Score = 89.7 bits (98), Expect = 1e-12
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| || || |||||||| || || ||||| | ||||| |||||||| || || || |||
Sbjct 1674 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAACCGTTGCTGGTCGGGTGGGATTCCCTCC 1733
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| ||||| || ||| ||| ||||||||||| || || || || | |||
Sbjct 1734 TTGTCCTGGATTTTGCTCTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTG 1793
Query 225676 ATCGTCTTGCCCGT 225689
|| |||||||||||
Sbjct 1794 ATGGTCTTGCCCGT 1807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192472099644392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |