Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq295 232 1e-55
seq426 125 1e-23
>seq295
Length=8791
Score = 232 bits (256), Expect = 1e-55
Identities = 418/611 (68%), Gaps = 0/611 (0%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| || || || | ||||| |||| || || |||||| || || | | | |
Sbjct 1915 TCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTC 1856
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
||||| |||| | || ||| || ||||| || ||||| || |||| ||||||| |||
Sbjct 1855 CACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAG 1796
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
|||||||||| | | |||||| || || ||||| || || | ||||| |
Sbjct 1795 AGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAAG 1736
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
||||| | ||||| || || ||||| || || | | | || || || || |||||||||
Sbjct 1735 ATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCCC 1676
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
||||| | |||||| || || || || |||| | | ||| |||| ||| || || ||
Sbjct 1675 TGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGAG 1616
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
| |||||| ||||| | ||| ||| ||| ||||||| ||| || ||
Sbjct 1615 GAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGACCA 1556
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || | || || || | |||||| |||||| ||||| || || |||||
Sbjct 1555 ATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTCG 1496
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999
||||| || ||| |||| | | ||||| || || ||| ||| | || || ||
Sbjct 1495 ATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACCA 1436
Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059
||||| || | ||| ||||| || |||||||| |||| | || | ||||| || ||
Sbjct 1435 GCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGTC 1376
Query 77060 TCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGC 77119
|| || ||| |||| ||| ||||||||| ||||| |||||||| | ||| ||
Sbjct 1375 TCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATGTGT 1316
Query 77120 TGAGGTCGTTC 77130
|| || |||||
Sbjct 1315 TGCGGGCGTTC 1305
>seq426
Length=8128
Score = 125 bits (138), Expect = 1e-23
Identities = 154/210 (73%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688
||| || |||||| || | ||| || || | | || | |||||||||||||| ||
Sbjct 5023 ACAGGCGAAATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAG 4964
Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748
||||||||| || || || || |||||||| || |||| || ||||||||| |||||
Sbjct 4963 CCCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAA 4904
Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA---TG 46805
|||||||| ||||||||||| ||||| || | || | | | || | || ||| |
Sbjct 4903 GATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAAGCTAGATTCTTTATCCTC 4844
Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTT 46835
|||||||| |||||||||||||| ||
Sbjct 4843 AATCCACCGGATGGCCCAATCAGCCTTCTT 4814
Score = 123 bits (136), Expect = 4e-23
Identities = 214/310 (69%), Gaps = 7/310 (2%)
Strand=Plus/Minus
Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950
||||| | |||||| || |||| || || | || || ||||| ||||| ||
Sbjct 4695 TCTTTGATATATGTGTCGATTAGGAGGGAGTAAGTCTCGGAGTGAATATTTTCCATCATG 4636
Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010
||||| || || || || || | || |||| | ||| || || | | ||| || ||
Sbjct 4635 ATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGTACCTGAACTTCACTGCTAAAACGCTCG 4576
Query 47011 GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATA 47070
|| ||||| || || || ||||| || || ||||||||||| ||||| |||
Sbjct 4575 ACCAGGTTCTCGTTGACAATGCCATCCGAGGCGGCGAAAAATGCCAAGACATGGGAGATA 4516
Query 47071 AAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCT 47127
|||||| |||||| ||| | || ||||| || | | |||||| || | |||
Sbjct 4515 AAATATCGCTCATCGTCGTTCAATCTGTTGTTCCAATCGTGAAGATCTTTCGAGAGATCA 4456
Query 47128 ACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGA 47187
| |||||| || ||||||||||||||||| ||||| |||||||| | ||| || | |
Sbjct 4455 ATTTCTTCTGCAGTCCAGAATGACGCCTCCGCTTTCTTATACATTTGCCAGAT----CTA 4400
Query 47188 TATTGGATCG 47197
||||| ||||
Sbjct 4399 TATTGAATCG 4390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712899929621760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |