Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq295 232 1e-55 seq426 125 1e-23 >seq295 Length=8791 Score = 232 bits (256), Expect = 1e-55 Identities = 418/611 (68%), Gaps = 0/611 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || | ||||| |||| || || |||||| || || | | | | Sbjct 1915 TCAAACTCTTCGCCATAGACATCTGCCAAGCCTGGCGCTTCATTGGGGCAAAAGAGAGTC 1856 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 ||||| |||| | || ||| || ||||| || ||||| || |||| ||||||| ||| Sbjct 1855 CACTCGCCATTCTTCTCAACACGCTTCATGAACAGATCGGGCGTCCAGAGAGCAAGAAAG 1796 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 |||||||||| | | |||||| || || ||||| || || | ||||| | Sbjct 1795 AGATCTCGGGCGCGAACTTCTTCCTTACCATGGTTCTTACGGAGGTCCAAAAACTCAAAG 1736 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 ||||| | ||||| || || ||||| || || | | | || || || || ||||||||| Sbjct 1735 ATATCGGTGTGCCACGGCTCGAGATAAATAGCGAAAGCTCCTGGCCGCTTGTTACCTCCC 1676 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 ||||| | |||||| || || || || |||| | | ||| |||| ||| || || || Sbjct 1675 TGATCGACATATCTAGCGGTATTGTTGAAAACGCGGAGCATGGGAACAATTCCATTTGAG 1616 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | |||||| ||||| | ||| ||| ||| ||||||| ||| || || Sbjct 1615 GAACCATTCGTTCCCGCAATGTAAGAGCCAGTACCACGAATGCGGTGAATGTTGAGACCA 1556 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || || || | |||||| |||||| ||||| || || ||||| Sbjct 1555 ATACCACCAGCAGTCTTTGAAATCAAAGCACAAGTTTTCAACGTGTCGTAAATACCCTCG 1496 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 ||||| || ||| |||| | | ||||| || || ||| ||| | || || || Sbjct 1495 ATACTGTCTTCCTTCATATCGATGAGAAAGCAAGAAGCCATCTGAGGTTGGGGGGTACCA 1436 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| || | ||| ||||| || |||||||| |||| | || | ||||| || || Sbjct 1435 GCATTGAAGAGTGTGGGAGAAGCGTGAGTGAAAAATTTCTGGGACATGAGATTATAGGTC 1376 Query 77060 TCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGC 77119 || || ||| |||| ||| ||||||||| ||||| |||||||| | ||| || Sbjct 1375 TCGATGACTTTCTCTACATCATCCCCATGAATTCCAACAGCAACACGCATGATCATGTGT 1316 Query 77120 TGAGGTCGTTC 77130 || || ||||| Sbjct 1315 TGCGGGCGTTC 1305 >seq426 Length=8128 Score = 125 bits (138), Expect = 1e-23 Identities = 154/210 (73%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| || |||||| || | ||| || || | | || | |||||||||||||| || Sbjct 5023 ACAGGCGAAATCAGTGTGCAAGCCCTCGTCACGAGAGATAAGCTCGTTAGAAAATGTAAG 4964 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 ||||||||| || || || || |||||||| || |||| || ||||||||| ||||| Sbjct 4963 CCCAGGCATGAGGCCTCGTTTCTTGAGCCAGAAGATAGAAGCAAAAGATCCACTGAAGAA 4904 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA---TG 46805 |||||||| ||||||||||| ||||| || | || | | | || | || ||| | Sbjct 4903 GATGCCTTCAACAGCCGCGAAGGCGACGAGGCGCTGTGCAAAGCTAGATTCTTTATCCTC 4844 Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTT 46835 |||||||| |||||||||||||| || Sbjct 4843 AATCCACCGGATGGCCCAATCAGCCTTCTT 4814 Score = 123 bits (136), Expect = 4e-23 Identities = 214/310 (69%), Gaps = 7/310 (2%) Strand=Plus/Minus Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950 ||||| | |||||| || |||| || || | || || ||||| ||||| || Sbjct 4695 TCTTTGATATATGTGTCGATTAGGAGGGAGTAAGTCTCGGAGTGAATATTTTCCATCATG 4636 Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010 ||||| || || || || || | || |||| | ||| || || | | ||| || || Sbjct 4635 ATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGTACCTGAACTTCACTGCTAAAACGCTCG 4576 Query 47011 GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATA 47070 || ||||| || || || ||||| || || ||||||||||| ||||| ||| Sbjct 4575 ACCAGGTTCTCGTTGACAATGCCATCCGAGGCGGCGAAAAATGCCAAGACATGGGAGATA 4516 Query 47071 AAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCT 47127 |||||| |||||| ||| | || ||||| || | | |||||| || | ||| Sbjct 4515 AAATATCGCTCATCGTCGTTCAATCTGTTGTTCCAATCGTGAAGATCTTTCGAGAGATCA 4456 Query 47128 ACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGA 47187 | |||||| || ||||||||||||||||| ||||| |||||||| | ||| || | | Sbjct 4455 ATTTCTTCTGCAGTCCAGAATGACGCCTCCGCTTTCTTATACATTTGCCAGAT----CTA 4400 Query 47188 TATTGGATCG 47197 ||||| |||| Sbjct 4399 TATTGAATCG 4390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712899929621760