Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1161 134 3e-26 >seq1161 Length=5408 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || || || |||||||| || ||||| | | || | ||||| Sbjct 3949 GAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATC 4008 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| ||||||||||| || | |||||||| | | ||| || || || || Sbjct 4009 CTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTC 4068 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| ||||| ||| || | || | | | ||||| ||||| ||||| || || ||||| Sbjct 4069 TTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGT 4128 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||||| || || ||||| ||||||| ||||||| Sbjct 4129 TTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||| ||| |||||||||||||| |||| | || | |||||||| || Sbjct 3730 ATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCTTCCAGCTG 3789 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || || ||||| || | ||||||||| | | || |||||||| || |||||||| Sbjct 3790 CTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAATTTT 3849 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 || || | || | | || || ||||| ||||| || || || |||||||| || Sbjct 3850 ACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCCGGT 3909 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| | |||||| Sbjct 3910 CAGGGTTTTCACGAAAATCTGCAT 3933 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| ||||| || || || || || || ||||| | || || | |||||| Sbjct 4178 AGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCT 4237 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| || | ||||| || | | ||| || ||||| | Sbjct 4238 TCCAGCTGCTTT--CCCGCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGT 4295 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || ||||| || ||| | || | | | || ||| || || || | ||||| | Sbjct 4296 CCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAATGG 4355 Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094 | ||||| || ||||| || |||| Sbjct 4356 TCTTGCCAGTTAGAGTTTTGACGA 4379 Score = 84.2 bits (92), Expect = 5e-11 Identities = 102/137 (74%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | |||||||||||||| || || || |||||||| | | ||| | Sbjct 4479 GAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACG 4538 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || ||||| || ||||| ||||| | |||||||| | | ||| ||| Sbjct 4539 GCCGTCTTCCAGCTGCTTT--CCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCT 4596 Query 152004 TCCTTTTCTTGAATTTT 152020 ||||| |||||||| || Sbjct 4597 TCCTTGTCTTGAATCTT 4613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153763618083428