Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1161 134 3e-26
>seq1161
Length=5408
Score = 134 bits (148), Expect = 3e-26
Identities = 158/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| || || || || || |||||||| || ||||| | | || | |||||
Sbjct 3949 GAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGAAAGTGTCCGGCCATC 4008
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || ||| ||||||||||| || | |||||||| | | ||| || || || ||
Sbjct 4009 CTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTGTC 4068
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||| ||||| ||| || | || | | | ||||| ||||| ||||| || || |||||
Sbjct 4069 TTGGATTTTGCTTTTAACGTTATCAATGGTATCTGAGCTCTCGACTTCCAGGGTGATAGT 4128
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|||||| || || ||||| ||||||| |||||||
Sbjct 4129 TTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162
Score = 107 bits (118), Expect = 4e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| ||||| ||| |||||||||||||| |||| | || | |||||||| ||
Sbjct 3730 ATGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCTTCCAGCTG 3789
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
|| || || ||||| || | ||||||||| | | || |||||||| || ||||||||
Sbjct 3790 CTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAATTTT 3849
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|| || | || | | || || ||||| ||||| || || || |||||||| ||
Sbjct 3850 ACTCTTTACGTTGTCAATAGTATCGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCCGGT 3909
Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104
|| || |||||||| | ||||||
Sbjct 3910 CAGGGTTTTCACGAAAATCTGCAT 3933
Score = 84.2 bits (92), Expect = 5e-11
Identities = 142/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||||||||| ||||| || || || || || || ||||| | || || | ||||||
Sbjct 4178 AGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGACAAGGTGCGGCCATCT 4237
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || || ||||| || | ||||| || | | ||| || ||||| |
Sbjct 4238 TCCAGCTGCTTT--CCCGCAAAGATCAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGT 4295
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| || ||||| || ||| | || | | | || ||| || || || | ||||| |
Sbjct 4296 CCTGGATTTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCACCTCCAATGTAATGG 4355
Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094
| ||||| || ||||| || ||||
Sbjct 4356 TCTTGCCAGTTAGAGTTTTGACGA 4379
Score = 84.2 bits (92), Expect = 5e-11
Identities = 102/137 (74%), Gaps = 4/137 (3%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | |||||||||||||| || || || |||||||| | | ||| |
Sbjct 4479 GAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAAAGAGTACG 4538
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || ||||| || ||||| ||||| | |||||||| | | ||| |||
Sbjct 4539 GCCGTCTTCCAGCTGCTTT--CCAGCGAAAATAAGACGTTGCTGGTCGGGAGGGATGCCT 4596
Query 152004 TCCTTTTCTTGAATTTT 152020
||||| |||||||| ||
Sbjct 4597 TCCTTGTCTTGAATCTT 4613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153763618083428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |