Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18] 3,868 sequences; 32,310,953 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1161 172 1e-37 seq849 129 1e-24 seq602 105 1e-17 >seq1161 Length=5408 Score = 172 bits (190), Expect = 1e-37 Identities = 180/231 (78%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || || || | ||| ||| |||||||| || || || | Sbjct 3934 ACCACCCCGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTTTGGATATTATAATCCGA 3993 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| |||||||| ||||| ||||| | ||||| ||||| || Sbjct 3994 AAGTGTCCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGG 4053 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCT-TCG 283049 |||||||| ||||||||||| ||||||||| ||| |||| || || || | |||| ||| Sbjct 4054 GATACCCTCTTTGTCTTGGAT-TTTGCTTTTAACGTTATCAATGGTATCTG-AGCTCTCG 4111 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||| || ||||| || || || |||| ||||||||||| ||||||||| Sbjct 4112 ACTTCCAGGGTGATAGTTTTGCCGGTCAGTGTCTTAACGAAGATCTGCATT 4162 Score = 123 bits (136), Expect = 5e-23 Identities = 150/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| || ||||||||||||||||| | || || || ||||| || || || || || Sbjct 3737 GTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCGACCATCTTCCAGCTGCTTACCA 3796 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TT 283021 |||||||| | || || ||||| ||||| || ||||| || || || ||| || || Sbjct 3797 GCAAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCTTCCTTATCCTGAAT-TTTACTCTT 3855 Query 283022 TACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAG 283080 |||| | || ||||| | || |||| || |||||||| ||||| || || || |||| | Sbjct 3856 TACGTTGTCAATAGTAT-CGGAGCTCTCAACTTCGAGTGTGATGGTTTTGCCGGTCAGGG 3914 Query 283081 TCTTAACGAATATCTGCAT 283099 | || ||||| |||||||| Sbjct 3915 TTTTCACGAAAATCTGCAT 3933 Score = 123 bits (136), Expect = 5e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 |||||||| || ||||| || ||||| | || ||| || || || || || |||| | Sbjct 4163 CCACCACGGAGACGAAGGACAAGATGGAGAGTCGATTCCTTCTGAATATTATAATCAGAC 4222 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || || || || || |||||||||| |||||| || || || Sbjct 4223 AAG-GTGCGGCCATCTTCCAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCTGGTGG 4281 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| ||||| ||| || ||||| | || || || || |||| ||| | Sbjct 4282 GATGCCCTCCTTGTCCTGGAT-TTTACTCTTTACATTGTCAATGGTATCAGAAGATTCCA 4340 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || | || || ||||| || || | ||| || |||| | | ||||| Sbjct 4341 CCTCCAATGTAATGGTCTTGCCAGTTAGAGTTTTGACGACTGTGTGCAT 4389 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || | || || || || || ||||| |||| | Sbjct 4471 CCTCCACGGAGACGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTGTAATCAGAA 4530 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| || || || || || || || || || | |||||| ||||| || Sbjct 4531 AGAGTACGGCCGTCTTCCAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCGGGAGGG 4590 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||| ||||| | || || | |||||||| || | || || Sbjct 4591 ATGCCTTCCTTGTCTTGAATCTTAGACTTAACCGCGTCGATAGTATCACCTGACTCAACC 4650 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||||||||| ||||| || || Sbjct 4651 TCGAGAGTGATGGTCTTGCCGGT 4673 >seq849 Length=6452 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || || ||||| || ||| |||||| ||||| ||||| || || || |||||||||||| Sbjct 1644 TTCTGAATGTTATAATCACTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 1703 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 || ||||| ||||| || || ||||||||||| ||||| |||||| || || | || Sbjct 1704 AACCGTTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGAT-TTTGCTCTTGACATTGTC 1762 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| | ||||| || |||||||| ||||| ||||| | ||||| ||||| Sbjct 1763 GATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 1822 >seq602 Length=25977 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || || || || || | || || || |||||||||||||||| Sbjct 7921 ACCACCGCGCAGACGTAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 7980 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| ||||||| ||||| ||||| || Sbjct 7981 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGG 8040 Query 282992 AATACCCTCCTTGTCT 283007 || |||||||||||| Sbjct 8041 GATTCCCTCCTTGTCT 8056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046687324913672