Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq95 167 5e-36
>seq95
Length=147769
Score = 167 bits (184), Expect = 5e-36
Identities = 284/407 (70%), Gaps = 6/407 (1%)
Strand=Plus/Minus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
||||||| |||||| ||| || | ||||| || ||| | | ||||||||| |||
Sbjct 14503 CCATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAACGAGCTCA 14444
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGA 230356
|| ||| ||||||||| | ||| | |||| || ||| || | || ||
Sbjct 14443 TCTCTCGTGACGAGGGTATGCATACCGACTTCGCTTGCCTGCTGTTCTCGCACATCAAGT 14384
Query 230357 ACAAGCTACCATTCGAGACG--GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414
|||| ||| | || | ||| | | ||||| || || || || || | ||| ||
Sbjct 14383 CGAAGC--CCAGCCCCGATGCCGTCGAGAAGATCATCACCGAGGCCGTAGATATCGAGAA 14326
Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGG 230473
||||||| | || || |||| ||||| || | ||||||||||| | ||||||
Sbjct 14325 GGAGTTCCTCACGGATGCCCTTCCC-GTCGCTCTCCTCGGCATGAACGCCAATCTTATGC 14267
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
| |||||||| || ||||| || |||||| | | || ||||| || || |||| | |
Sbjct 14266 GCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCACTGGGCAACAAGAAGTTCT 14207
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
||||||| | |||||||| | || |||||| ||| |||||| | || ||||||||||
Sbjct 14206 ACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCAAGACCAACT 14147
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAAG 230640
||||||| ||||| || ||||||| |||| | | ||||| ||| ||
Sbjct 14146 TCTTCGAGAAGCGCGTTGGTGACTACCAGAAGGCGGGTGTCATGGAG 14100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057808630478420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |