Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq95 167 5e-36 >seq95 Length=147769 Score = 167 bits (184), Expect = 5e-36 Identities = 284/407 (70%), Gaps = 6/407 (1%) Strand=Plus/Minus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| |||||| ||| || | ||||| || ||| | | ||||||||| ||| Sbjct 14503 CCATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTCACTTTCTCTAACGAGCTCA 14444 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGA 230356 || ||| ||||||||| | ||| | |||| || ||| || | || || Sbjct 14443 TCTCTCGTGACGAGGGTATGCATACCGACTTCGCTTGCCTGCTGTTCTCGCACATCAAGT 14384 Query 230357 ACAAGCTACCATTCGAGACG--GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414 |||| ||| | || | ||| | | ||||| || || || || || | ||| || Sbjct 14383 CGAAGC--CCAGCCCCGATGCCGTCGAGAAGATCATCACCGAGGCCGTAGATATCGAGAA 14326 Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGG 230473 ||||||| | || || |||| ||||| || | ||||||||||| | |||||| Sbjct 14325 GGAGTTCCTCACGGATGCCCTTCCC-GTCGCTCTCCTCGGCATGAACGCCAATCTTATGC 14267 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 | |||||||| || ||||| || |||||| | | || ||||| || || |||| | | Sbjct 14266 GCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCACTGGGCAACAAGAAGTTCT 14207 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 ||||||| | |||||||| | || |||||| ||| |||||| | || |||||||||| Sbjct 14206 ACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTAACGGCAAGACCAACT 14147 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAAG 230640 ||||||| ||||| || ||||||| |||| | | ||||| ||| || Sbjct 14146 TCTTCGAGAAGCGCGTTGGTGACTACCAGAAGGCGGGTGTCATGGAG 14100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057808630478420