Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq95 95.1 1e-14 >seq95 Length=147769 Score = 95.1 bits (104), Expect = 1e-14 Identities = 332/511 (65%), Gaps = 8/511 (2%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| || | |||||| || ||||| ||||| || ||||| | || || || |||||| Sbjct 14119 TGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGATGTTCTCC 14178 Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | || | | | |||||| | | | | Sbjct 14179 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTG--TTGCCCAGTGCCACCAGCA 14236 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTA-ATTCGCAGTTCATTCCTATAAGA 16852 | || || || || || || || |||| ||| | ||| || |||||| || | ||| Sbjct 14237 GGCGGTCTGCGACGAACTCAATGTACTGGCGCATAAGATTGGC-GTTCATGCCGAGGAGA 14295 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || ||||| || ||||| | || || || ||| ||| | || || || | || || Sbjct 14296 GCGACGGGAAGGGCATCCGTGAGGAACTCCTT-CTCGATATCTACGGCCTCGGTGATGAT 14354 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 | | || || | || | || | || |||| ||| || ||||| Sbjct 14355 CTTCTCGACGGCATCGGGGCTGGGCTTCGACTTGATGTGCGAGAACAGCAGGCAAGCGAA 14414 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 ||| ||| | |||||||| | ||| || |||||||| || || | |||||||| Sbjct 14415 GTCGGTATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCAT 14474 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 || || ||||| | ||| || || | ||||| || ||| ||||| |||||||| Sbjct 14475 GAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTC 14534 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 ||| | ||||| ||||| | || ||| | |||| || |||| | ||||| Sbjct 14535 GACAGCCGCAAAAGCGATCAGGCGCGATGCGAAAGTCGAGTTCTTGTCGCAGATCCAGCG 14594 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182 | | |||| ||||| || | ||| || ||| Sbjct 14595 CAGGGCCCAGTCGGCCTTCTTCTTGATACAA 14625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517538263791120