Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq95 95.1 1e-14
>seq95
Length=147769
Score = 95.1 bits (104), Expect = 1e-14
Identities = 332/511 (65%), Gaps = 8/511 (2%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| || | |||||| || ||||| ||||| || ||||| | || || || ||||||
Sbjct 14119 TGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTAAGCGAGATGTTCTCC 14178
Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || || || | | || | | | |||||| | | | |
Sbjct 14179 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGAACTTCTTG--TTGCCCAGTGCCACCAGCA 14236
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTA-ATTCGCAGTTCATTCCTATAAGA 16852
| || || || || || || || |||| ||| | ||| || |||||| || | |||
Sbjct 14237 GGCGGTCTGCGACGAACTCAATGTACTGGCGCATAAGATTGGC-GTTCATGCCGAGGAGA 14295
Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
|| ||||| || ||||| | || || || ||| ||| | || || || | || ||
Sbjct 14296 GCGACGGGAAGGGCATCCGTGAGGAACTCCTT-CTCGATATCTACGGCCTCGGTGATGAT 14354
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
| | || || | || | || | || |||| ||| || |||||
Sbjct 14355 CTTCTCGACGGCATCGGGGCTGGGCTTCGACTTGATGTGCGAGAACAGCAGGCAAGCGAA 14414
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
||| ||| | |||||||| | ||| || |||||||| || || | ||||||||
Sbjct 14415 GTCGGTATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTGAGACCGGGCAT 14474
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
|| || ||||| | ||| || || | ||||| || ||| ||||| ||||||||
Sbjct 14475 GAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCACTGAAGAAGATACCCTC 14534
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
||| | ||||| ||||| | || ||| | |||| || |||| | |||||
Sbjct 14535 GACAGCCGCAAAAGCGATCAGGCGCGATGCGAAAGTCGAGTTCTTGTCGCAGATCCAGCG 14594
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182
| | |||| ||||| || | ||| || |||
Sbjct 14595 CAGGGCCCAGTCGGCCTTCTTCTTGATACAA 14625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517538263791120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |