Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq95 100 3e-16 >seq95 Length=147769 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || ||||| ||| || | ||||||||| | | || | ||||| || Sbjct 14398 AACAGCAGGCAAGCGAAGTCGGTATGCATACCCTCGTCACGAGAGATGAGCTCGTTAGAG 14457 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| |||||||| ||||||||||| || ||||| || ||||| || || |||||| Sbjct 14458 AAAGTGAGACCGGGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGATCCA 14517 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 24283 ||||| || || || || |||||||| || || || Sbjct 14518 CTGAAGAAGATACCCTCGACAGCCGCAAAAGCGATCAG 14555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593713183996320