Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq121 152 6e-32 >seq121 Length=97770 Score = 152 bits (168), Expect = 6e-32 Identities = 212/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 |||||||||||| | | ||||| |||||||||||||| ||||| || || Sbjct 12146 CACGTAGAACTGCGCGAACATATGGCAAGGCGGCAGGGCCATCTTTTTTAGGTCTGCGGG 12205 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||| ||| | | || || | | | | ||| || |||| | || | |||| Sbjct 12206 GTTCCACGCGCTCATGATGATGCGACGGTCATAGGGCTTGTTCTTCAGCTTGTCAATCAC 12265 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 ||| ||||| ||||||||||||||| || || ||||| | |||||| || |||| Sbjct 12266 GTCGGCCAGCTGATCCACGCCCTGCCCCGTATAGTCCGTCTTTGCGTCCACATATTCGGC 12325 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 |||||||| | ||| ||||| ||||||||||| || ||||| || ||| | |||| Sbjct 12326 GCCGAAGTGTCGCCATTGGAAGCCGTAGACGGGGCCAAGGTCGCCTTCCTCGCGGTGCGA 12385 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 || ||| | | | ||||||| || || || || ||| ||||||||||||||| ||| Sbjct 12386 GAGGCCGACGCTGTCGAGGAACTCGCGAGATCCATTGCCGTCCCAGATCTTGATGCC 12442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590068435661360