Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq125 105 6e-18 seq63 87.8 2e-12 >seq125 Length=94255 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | ||| | || |||||||| || ||||| || |||| | Sbjct 35874 CCACCGCGCAGGCGGAGGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAC 35815 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||| ||| ||||| || | ||||| | |||||||||| ||| Sbjct 35814 AGGGTGCGGCCATCTTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGA 35755 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| ||||| | ||| Sbjct 35754 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCCGACGACTCGACC 35695 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| |||||||||||||| Sbjct 35694 TCAAGGGTGATGGTCTTGCCGGT 35672 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| ||| ||||||||||||||||| ||||| | | Sbjct 36613 CCACCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAC 36554 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | |||| |||||||| || || || | || || | |||||||||| ||| Sbjct 36553 AGCGTACGACCGTCTTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 36494 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || |||||| ||||| | ||| ||||| | ||| Sbjct 36493 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATGGTATCCGAAGATTCCACC 36434 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| || || | || ||||| || || ||||| Sbjct 36433 TCGAGCGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 36387 >seq63 Length=225829 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045 |||| || ||||| ||||| | |||||| || | ||||| ||||| ||||| || | | Sbjct 138091 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138032 Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC 21105 | || | |||||||||| ||| | ||| |||||||| |||||| || || | | Sbjct 138031 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 137972 Query 21106 CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165 ||| || ||| || ||| || | ||| ||||||||||| || | || ||||| | Sbjct 137971 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 137912 Query 21166 A 21166 | Sbjct 137911 A 137911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422253364113944