Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08-
31] 1,134 sequences; 47,389,336 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq163 179 8e-40
>seq163
Length=51182
Score = 179 bits (198), Expect = 8e-40
Identities = 291/415 (70%), Gaps = 39/415 (9%)
Strand=Plus/Minus
Query 253999 ACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGG 254058
|||| || || |||| ||| |||| || ||||| || ||||||||||| |||||||| |
Sbjct 21847 ACCTGCCGCACATGCTCTTCTACGGGCCGCCCGGCACCGGCAAGACGTCCACCATCCTCG 21788
Query 254059 CGCTGGCCCGAACC--CTGTT-GGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGA 254115
|||||||| || | || | |||| | | || | ||||||||||||||| |
Sbjct 21787 CGCTGGCC--AAGCAGCTCTACGGGCCCGACCTGC-TGCGCTCGCGCGTGCTCGAGCTCA 21731
Query 254116 ACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC----C 254171
|||| || ||||| ||||| | | | |||| ||||||||| |||||| ||| | |
Sbjct 21730 ACGCGTCGGACGAGCGCGGCATCGGCATCGTGCGCGACAAGGTCAAGAACTTCGCGCGGC 21671
Query 254172 A--AGATGTCGATTTCGTCGT---------------TCCA--ACC--CGGCTGT------ 254204
| || |||||| || || || | ||| |||| ||
Sbjct 21670 AGCAGCTGTCGAACCCGCCGGCGGGCCCTGCCGGCGTCGAGTACCGCCGGCGGTATCCGT 21611
Query 254205 --CCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGT 254262
||||| |||||| || | | |||||||||||||| | ||||||| || ||||||
Sbjct 21610 GCCCGCCGTTCAAGATCATCGTGCTGGACGAGGCGGATAGCATGACGCAGGATGCGCAGA 21551
Query 254263 CCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCA 254322
||| || || || |||||||||||| ||||| | ||||| ||||| ||||||||||
Sbjct 21550 GCGCGCTGCGGCGGACGATGGAGACGTACTCCCGGATCACGCGGTTTTGTCTGGTGTGCA 21491
Query 254323 ACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377
|||||||| || |||||||| |||||||| ||||||| | |||||||| ||
Sbjct 21490 ACTACGTGACGCGGATCATCGATCCGCTGGCGAGTCGGTGCTCGAAGTTTCGGTT 21436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073750798845312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |