Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq121 82.4 7e-11 >seq121 Length=97770 Score = 82.4 bits (90), Expect = 7e-11 Identities = 162/238 (68%), Gaps = 9/238 (4%) Strand=Plus/Plus Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169 |||||| ||||| || | || ||||| || || |||||| ||||| ||||| Sbjct 12146 CACGTAGAACTGCGCGAACATATGGCAAGGCGGCAGGGCCATCTTTTTTAGGTCTGCGGG 12205 Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAG---ATCCAC 21226 ||||||||||| ||| | |||||| || || | || || |||| | || || | Sbjct 12206 GTTCCACGCGCTCATGATGATGCGACGGTCATAGG---GCTTGTTCTTCAGCTTGTCAAT 12262 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 ||||| |||||| ||||| ||||| ||| |||| | | || || || || Sbjct 12263 CACGTCGGCCAGCTGATCCACGCCCTGCCCCGTATAGTCCGTCTTTGCGTCCACATATTC 12322 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGG 21341 || || || |||| ||| ||||| ||||| || || || || |||| |||||||| Sbjct 12323 GGCGCCGAAGTGTCGCCATTGGAAGCCGTAGACGGGGCCAAGGTCGCCTTCCTCGCGG 12380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427770087868320