Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryosphaeria_20dothidea_20[genbank_20GCA_5F001717445.1_202016-08- 31] 1,134 sequences; 47,389,336 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq95 82.4 8e-11 >seq95 Length=147769 Score = 82.4 bits (90), Expect = 8e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||| || || || || ||||| | ||||| || | ||||| | | | ||| Sbjct 14345 GAGGCCGTAGATATCGAGAAGGAGTTCCTCACGGATGCCCTTCCCGTCGCTCTCCTCGGC 14286 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| | | ||| || ||||||| ||||| || || ||| | ||| || || Sbjct 14285 ATGAACGCCAATCTTATGCGCCAGTACATTGAGTTCGTCGCAGACCGCCTGCTGGTGGCA 14226 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 || || | ||| | ||| || | |||||||| || ||| | ||||| ||| Sbjct 14225 CTGGGCAACAAGAAGTTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCG 14166 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||||| || ||||| ||||||| || || || || ||| Sbjct 14165 CTTAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTAC 14121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496056968292800